Factsheet for VIT_14s0108g00920.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 3
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
ChloroP:	plastid
EpiLoc:	cytosol
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98781	Soybean	plasma membrane	72.43	72.43
KRG98790	Soybean	plasma membrane	71.03	71.03
GSMUA_Achr10P...	Banana	plastid	68.69	70.33
Bra006030.1-P	Field mustard	plasma membrane	58.88	66.67
Solyc05g007920.2.1	Tomato	cytosol	69.63	66.22
PGSC0003DMT400090619	Potato	cytosol	70.09	65.79
Zm00001d044822_P001	Maize	plastid	59.35	61.95
Bra025657.1-P	Field mustard	plastid	70.09	61.48
CDX74441	Canola	plastid	69.63	61.07
CDX81135	Canola	plastid	68.69	60.74
AT5G39650.1	Thale cress	plastid	69.16	60.66
AT1G09157.1	Thale cress	plastid	68.22	60.08
CDY56548	Canola	plastid	67.76	59.92
EER89477	Sorghum	plastid	59.35	59.91
CDY30259	Canola	plastid	34.58	55.64
VIT_13s0106g00720.t01	Wine grape	plasma membrane	35.05	35.55
VIT_12s0028g03070.t01	Wine grape	plasma membrane	35.51	35.51
VIT_12s0035g00920.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	37.38	33.47
VIT_10s0003g00320.t01	Wine grape	plasma membrane	36.45	31.84
VIT_05s0020g02280.t01	Wine grape	plastid	26.64	29.69
VIT_18s0086g00700.t01	Wine grape	plasma membrane	28.5	28.64

Protein Annotations

EntrezGene:100243883	wikigene:100243883	MapMan:13.7.1.4	ProteinID:CCB47562	ProteinID:CCB47562.1	InterPro:DMP
UniProt:F6H5U1	EMBL:FN595239	GO:GO:0000003	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0007275	GO:GO:0008150	GO:GO:0009705
GO:GO:0009987	GO:GO:0010256	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0030154
GO:GO:0048235	EntrezGene:LOC100243883	wikigene:LOC100243883	PFAM:PF05078	PANTHER:PTHR31621	PANTHER:PTHR31621:SF11
TMHMM:TMhelix	UniParc:UPI00015CA0AC	ArrayExpress:VIT_14s0108g00920	EnsemblPlantsGene:VIT_14s0108g00920	EnsemblPlants:VIT_14s0108g00920.t01	RefSeq:XP_002278425
RefSeq:XP_002278425.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr14:-:29571329..29572085

Molecular Weight (calculated)

23600.1 Da

IEP (calculated)

6.981

GRAVY (calculated)

0.251

Length

214 amino acids

Sequence
(BLAST)

001: MEQLEDLGIK VYNATPQEAS PCPSSSPRLA PEPGRKRRAV AKGVQKTLSK TSMLVNFLPT GTLLTFEMVL PSIYRNGECS SVSILMIHML LGLCCLSCFF
101: FHFTDGFRGP DGKVYYGFVT TKGLAVFKPG LEVEVPKDER FKVGLTDFVH ATMSVMVFIA IAFSDHRITD CLFPGHEKDM DEVMESFPLM VGIVCSGLFL
201: VFPNTRYGIG CMAA

Best Arabidopsis Sequence Match ( AT1G09157.1 )
(BLAST)

001: MEKTEESVGI RVYTTTTTQN PSPTSSRSPK PVPLSSLPML PAGAAAGGGK GRKRRMVAKG VQKTVSKTSM LVNFLPTGTL LMFEMVLPTI YRDGDCNGIN
101: TLMIHLLLLL CAMSCFFFHF TDSFKASDGK IYYGFVTPRG LAVFMKPPSP GFGGGDVIAE KEIPVTDERY KLRVNDFVHS VMSVLVFMAI AFSDRRVTGC
201: LFPGKEKEMD QVMESFPLMV GIVCSALFLV FPTSRYGVGC MST

Arabidopsis Description

DMP8Protein DMP8 [Source:UniProtKB/Swiss-Prot;Acc:O80493]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.