Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56548 | Canola | plastid | 91.39 | 92.15 |
| Bra006030.1-P | Field mustard | plasma membrane | 70.9 | 91.53 |
| CDX81135 | Canola | plastid | 90.57 | 91.32 |
| AT1G09157.1 | Thale cress | plastid | 90.16 | 90.53 |
| VIT_14s0108g00920.t01 | Wine grape | plastid | 60.66 | 69.16 |
| KRG98790 | Soybean | plasma membrane | 56.97 | 64.95 |
| KRG98781 | Soybean | plasma membrane | 56.56 | 64.49 |
| GSMUA_Achr10P... | Banana | plastid | 52.87 | 61.72 |
| Solyc05g007920.2.1 | Tomato | cytosol | 55.74 | 60.44 |
| Zm00001d044822_P001 | Maize | plastid | 50.41 | 60.0 |
| PGSC0003DMT400090619 | Potato | cytosol | 55.33 | 59.21 |
| EER89477 | Sorghum | plastid | 49.59 | 57.08 |
| AT4G28485.2 | Thale cress | plasma membrane, plastid | 31.97 | 39.0 |
| AT3G02430.1 | Thale cress | plastid | 31.97 | 35.62 |
| AT5G27370.1 | Thale cress | plasma membrane | 27.46 | 35.08 |
| AT4G24310.1 | Thale cress | plastid | 29.92 | 34.27 |
| AT5G46090.1 | Thale cress | plasma membrane | 29.92 | 34.11 |
| AT4G18425.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 29.51 | 33.8 |
| AT3G21550.1 | Thale cress | plasma membrane | 22.95 | 30.43 |
| AT3G21520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 24.59 | 28.99 |
Protein Annotations
| MapMan:13.7.1.4 | EntrezGene:833961 | UniProt:A0A178U7T9 | ProteinID:AED94459.1 | ArrayExpress:AT5G39650 | EnsemblPlantsGene:AT5G39650 |
| RefSeq:AT5G39650 | TAIR:AT5G39650 | RefSeq:AT5G39650-TAIR-G | EnsemblPlants:AT5G39650.1 | TAIR:AT5G39650.1 | EMBL:AY084319 |
| Unigene:At.30332 | ProteinID:BAB08897.1 | InterPro:DMP | EMBL:DQ447017 | EMBL:DQ653330 | GO:GO:0000003 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0009987 |
| GO:GO:0010256 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | GO:GO:0030154 | GO:GO:0048235 |
| RefSeq:NP_198781.1 | ProteinID:OAO89695.1 | PFAM:PF05078 | PO:PO:0000084 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF11 | UniProt:Q9FK96 | TMHMM:TMhelix | UniParc:UPI000005EAAD |
| SEG:seg | : | : | : | : | : |
Description
DMP9Protein DMP9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK96]
Coordinates
chr5:+:15875125..15876116
Molecular Weight (calculated)
26540.8 Da
IEP (calculated)
8.583
GRAVY (calculated)
0.211
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKTEESVGI RVYTATPPQK PSPSPPSRSP KPVLISSLPS LPSGAAAGGG RGRKRRMVAQ GVQKTVSKTS MLVNFLPTGT LLMFEMVLPS IYRDGDCNGI
101: NTLMIHLLLL LCAMSCFFFH FTDSFKASDG KIYYGFVTPR GLAVFMKPPP PEFGGGDVIA EAEIPVTDDR YKLTVNDFVH AVMSVLVFMA IAFSDRRVTG
201: CLFPGKEKEM DQVMESFPIM VGIVCSALFL VFPTTRYGVG CMTG
101: NTLMIHLLLL LCAMSCFFFH FTDSFKASDG KIYYGFVTPR GLAVFMKPPP PEFGGGDVIA EAEIPVTDDR YKLTVNDFVH AVMSVLVFMA IAFSDRRVTG
201: CLFPGKEKEM DQVMESFPIM VGIVCSALFL VFPTTRYGVG CMTG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.