Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT4G18425.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 73.83 | 74.18 |
| Bra025039.1-P | Field mustard | plasma membrane | 71.5 | 70.51 |
| CDY33452 | Canola | plasma membrane | 71.03 | 70.05 |
| CDY34571 | Canola | plasma membrane | 69.63 | 68.66 |
| CDX77630 | Canola | plasma membrane | 69.63 | 68.66 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 77.1 | 68.46 |
| Bra025040.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 77.1 | 68.46 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 77.1 | 68.46 |
| PGSC0003DMT400081227 | Potato | plasma membrane | 63.08 | 64.59 |
| Solyc02g077640.1.1 | Tomato | plasma membrane | 61.68 | 63.16 |
| CDY38243 | Canola | cytosol | 39.25 | 61.76 |
| VIT_13s0106g00720.t01 | Wine grape | plasma membrane | 60.75 | 61.61 |
| KRH21356 | Soybean | cytosol, peroxisome, plasma membrane | 57.94 | 58.77 |
| KRH20387 | Soybean | plasma membrane | 57.48 | 56.68 |
| GSMUA_Achr4P02720_001 | Banana | plasma membrane | 54.67 | 55.45 |
| GSMUA_Achr4P10580_001 | Banana | cytosol | 52.8 | 54.33 |
| VIT_10s0003g00320.t01 | Wine grape | plasma membrane | 60.75 | 53.06 |
| KXG33079 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 50.93 | 52.4 |
| AT4G28485.2 | Thale cress | plasma membrane, plastid | 47.2 | 50.5 |
| Zm00001d011558_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 48.13 | 49.52 |
| TraesCS3B01G273700.1 | Wheat | cytosol, peroxisome, plasma membrane | 42.99 | 49.2 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 47.66 | 47.66 |
| KRH50120 | Soybean | peroxisome | 45.79 | 47.12 |
| HORVU1Hr1G087380.1 | Barley | mitochondrion | 52.8 | 46.12 |
| TraesCS3A01G245800.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.73 | 45.87 |
| Os05t0562800-02 | Rice | plastid | 50.93 | 45.8 |
| AT3G21550.1 | Thale cress | plasma membrane | 35.05 | 40.76 |
| AT3G02430.1 | Thale cress | plastid | 41.12 | 40.18 |
| AT4G24310.1 | Thale cress | plastid | 39.72 | 39.91 |
| Os06t0352200-01 | Rice | plasma membrane, plastid | 44.86 | 37.94 |
| AT5G27370.1 | Thale cress | plasma membrane | 32.71 | 36.65 |
| AT3G21520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 33.18 | 34.3 |
| AT1G09157.1 | Thale cress | plastid | 34.11 | 30.04 |
| AT5G39650.1 | Thale cress | plastid | 34.11 | 29.92 |
Protein Annotations
| MapMan:35.1 | EntrezGene:834650 | ProteinID:AED95336.1 | ArrayExpress:AT5G46090 | EnsemblPlantsGene:AT5G46090 | RefSeq:AT5G46090 |
| TAIR:AT5G46090 | RefSeq:AT5G46090-TAIR-G | EnsemblPlants:AT5G46090.1 | TAIR:AT5G46090.1 | Unigene:At.55400 | ProteinID:BAB08254.1 |
| InterPro:DMP | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009705 |
| GO:GO:0009987 | GO:GO:0010256 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | RefSeq:NP_199421.1 |
| PFAM:PF05078 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000293 | PO:PO:0009001 | PO:PO:0009005 |
| PO:PO:0009046 | PO:PO:0009047 | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF0 | UniProt:Q9FNL3 | TMHMM:TMhelix |
| UniParc:UPI00000A4C10 | : | : | : | : | : |
Description
DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
Coordinates
chr5:+:18693485..18694129
Molecular Weight (calculated)
23630.7 Da
IEP (calculated)
4.782
GRAVY (calculated)
0.369
Length
214 amino acids
Sequence
(BLAST)
(BLAST)
001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.