Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 98.34 | 98.34 |
| CDY38243 | Canola | cytosol | 55.19 | 97.79 |
| AT5G46090.1 | Thale cress | plasma membrane | 68.46 | 77.1 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 64.73 | 72.9 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 64.73 | 72.9 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 64.73 | 72.9 |
| CDY33452 | Canola | plasma membrane | 64.73 | 71.89 |
| CDY34571 | Canola | plasma membrane | 63.49 | 70.51 |
| CDX77630 | Canola | plasma membrane | 63.07 | 70.05 |
| CDY60883 | Canola | cytosol | 64.73 | 69.64 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 63.9 | 68.75 |
| PGSC0003DMT400081227 | Potato | plasma membrane | 56.02 | 64.59 |
| VIT_13s0106g00720.t01 | Wine grape | plasma membrane | 56.02 | 63.98 |
| Solyc02g077640.1.1 | Tomato | plasma membrane | 55.19 | 63.64 |
| KRH21356 | Soybean | cytosol, peroxisome, plasma membrane | 52.28 | 59.72 |
| GSMUA_Achr4P10580_001 | Banana | cytosol | 49.38 | 57.21 |
| KRH20387 | Soybean | plasma membrane | 51.04 | 56.68 |
| GSMUA_Achr4P02720_001 | Banana | plasma membrane | 49.38 | 56.4 |
| VIT_10s0003g00320.t01 | Wine grape | plasma membrane | 54.77 | 53.88 |
| KXG33079 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 43.57 | 50.48 |
| KRH50120 | Soybean | peroxisome | 42.32 | 49.04 |
| CDY29909 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 40.25 | 48.5 |
| Zm00001d011558_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 41.49 | 48.08 |
| CDX92877 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 39.83 | 48.0 |
| CDY38387 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 39.42 | 47.5 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.49 | 46.73 |
| HORVU1Hr1G087380.1 | Barley | mitochondrion | 47.3 | 46.53 |
| TraesCS3B01G273700.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.1 | 46.52 |
| CDY35189 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 38.59 | 46.5 |
| Os05t0562800-02 | Rice | plastid | 45.23 | 45.8 |
| TraesCS3A01G245800.1 | Wheat | cytosol, peroxisome, plasma membrane | 40.25 | 44.5 |
| CDY34728 | Canola | plasma membrane, plastid | 38.59 | 42.08 |
| CDY24837 | Canola | plasma membrane, plastid | 37.34 | 41.1 |
| CDY08933 | Canola | plasma membrane | 36.51 | 39.82 |
| CDY03457 | Canola | plastid | 35.27 | 39.35 |
| CDY34278 | Canola | plasma membrane, plastid | 35.27 | 38.64 |
| Os06t0352200-01 | Rice | plasma membrane, plastid | 40.25 | 38.34 |
| CDY44328 | Canola | plasma membrane | 28.63 | 37.3 |
| CDY38623 | Canola | plasma membrane | 27.8 | 36.22 |
| CDY37280 | Canola | plasma membrane | 27.39 | 35.68 |
| CDY19288 | Canola | extracellular, plasma membrane, vacuole | 26.97 | 35.14 |
| CDY37281 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 26.97 | 32.18 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 20.75 | 31.25 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 26.14 | 31.19 |
| CDY38622 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 25.73 | 30.39 |
| CDX74441 | Canola | plastid | 29.46 | 29.1 |
| CDY30259 | Canola | plastid | 15.77 | 28.57 |
| CDX81135 | Canola | plastid | 28.22 | 28.1 |
| CDY56548 | Canola | plastid | 27.8 | 27.69 |
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 4.56 | 24.44 |
Protein Annotations
| EnsemblPlants:CDX77629 | EnsemblPlantsGene:GSBRNA2T00128555001 | GO:A0A078CNP3 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF0 |
| PFAM:PF05078 | ProteinID:CDX77629 | ProteinID:CDX77629.1 | TMHMM:TMhelix | UniParc:UPI0004EE0FE7 | MapMan:35.1 |
Description
BnaC07g18830D
Coordinates
chrLK031812:+:229920..230918
Molecular Weight (calculated)
26889.6 Da
IEP (calculated)
5.343
GRAVY (calculated)
0.214
Length
241 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIKVDEEAG IDDAHRIIEA EKVRRRIEAE KLRRMIQEEK VPLLEDDKIL IQTREFPAIE RNTWIQKAIG QTFQTTSHLA NLLPTGTVLA YQILSPIFTN
101: AGSCSLASRF MTATLVFICG FSCFILSFTD SYKDLNGNSC YGFATFNGFW IIDGSATLPP ERATTYKLRF IDFAHAIMSF LVFGAVVMFD QNAVKCFIPV
201: PSAEEAEILT ALPVGIGVFC SMLFATFPTT RHGIGFSLSD K
101: AGSCSLASRF MTATLVFICG FSCFILSFTD SYKDLNGNSC YGFATFNGFW IIDGSATLPP ERATTYKLRF IDFAHAIMSF LVFGAVVMFD QNAVKCFIPV
201: PSAEEAEILT ALPVGIGVFC SMLFATFPTT RHGIGFSLSD K
001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
Arabidopsis Description
DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.