Factsheet for PGSC0003DMT400081227

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g077640.1.1	Tomato	plasma membrane	93.78	93.78
VIT_13s0106g00720.t01	Wine grape	plasma membrane	72.73	72.04
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	70.33	69.67
KRH20387	Soybean	plasma membrane	66.51	64.06
AT5G46090.1	Thale cress	plasma membrane	64.59	63.08
CDY55785	Canola	cytosol, peroxisome, plasma membrane	64.59	63.08
CDX76524	Canola	cytosol, peroxisome, plasma membrane	64.59	63.08
CDX76523	Canola	cytosol, peroxisome, plasma membrane	64.59	63.08
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.59	63.08
GSMUA_Achr4P10580_001	Banana	cytosol	60.77	61.06
GSMUA_Achr4P02720_001	Banana	plasma membrane	61.24	60.66
AT4G18425.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	61.72	60.56
Bra025039.1-P	Field mustard	plasma membrane	62.2	59.91
CDX78854	Canola	cytosol, peroxisome, plasma membrane	64.11	59.82
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.11	59.82
VIT_10s0003g00320.t01	Wine grape	plasma membrane	69.86	59.59
CDY33452	Canola	plasma membrane	61.72	59.45
CDY60883	Canola	cytosol	63.64	59.38
CDX77630	Canola	plasma membrane	61.24	58.99
CDY34571	Canola	plasma membrane	61.24	58.99
KXG33079	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	55.98	56.25
CDX77629	Canola	cytosol, peroxisome, plasma membrane	64.59	56.02
CDY70034	Canola	cytosol, peroxisome, plasma membrane	64.59	56.02
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.59	56.02
KRH50120	Soybean	peroxisome	54.55	54.81
Os05t0562800-02	Rice	plastid	60.29	52.94
PGSC0003DMT400035732	Potato	plasma membrane	56.46	52.91
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	52.63	52.88
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	46.89	52.41
TraesCS3D01G245600.1	Wheat	cytosol, peroxisome, plasma membrane	51.67	50.47
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	51.67	49.54
HORVU1Hr1G087380.1	Barley	mitochondrion	57.89	49.39
PGSC0003DMT400064047	Potato	plasma membrane	50.24	46.05
CDY38243	Canola	cytosol	28.71	44.12
Os06t0352200-01	Rice	plasma membrane, plastid	49.76	41.11
PGSC0003DMT400081771	Potato	extracellular	33.97	40.8
PGSC0003DMT400090619	Potato	cytosol	36.84	33.77
PGSC0003DMT400015923	Potato	plasma membrane	31.1	30.81

Protein Annotations

EnsemblPlants:PGSC0003DMT400081227	EnsemblPlantsGene:PGSC0003DMG402031751	EntrezGene:102579399	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF0	PFAM:PF05078	PGSC:PGSC0003DMG402031751	RefSeq:XP_006364305.1
TMHMM:TMhelix	UniParc:UPI000296B1F1	UniProt:M1D4E7	MapMan:35.1	:	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG402031751]

Coordinates

chr2:+:33253250..33254263

Molecular Weight (calculated)

22866.9 Da

IEP (calculated)

4.613

GRAVY (calculated)

0.436

Length

209 amino acids

Sequence
(BLAST)

001: MEIKVENEIP RNLDEEKAPL LENSELPEVE KNLIQQAISQ TFKSTAHLAN LLPTGSVLAF QFLSPIFTNQ GQCDVVGRSL TAALVALCGL SCFLLSFTDS
101: FKDQKGNVCY GFATTCGLWI IDGSATLPLE AAAKYKLKFI DFMHAIMSIL VFAAVALFDQ NVVNCFYPTP SYETQELLTA LPVAIGVICS MLFVVFPTQR
201: HGIGFPLTC

Best Arabidopsis Sequence Match ( AT5G46090.1 )
(BLAST)

001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK

Arabidopsis Description

DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.