Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX78854 Canola cytosol, peroxisome, plasma membrane 96.88 96.88
CDX76523 Canola cytosol, peroxisome, plasma membrane 87.5 91.59
CDX76524 Canola cytosol, peroxisome, plasma membrane 87.5 91.59
CDY55785 Canola cytosol, peroxisome, plasma membrane 87.5 91.59
AT4G18425.1 Thale cress endoplasmic reticulum, peroxisome, plasma membrane 83.48 87.79
CDY33452 Canola plasma membrane 63.39 65.44
CDX77629 Canola cytosol, peroxisome, plasma membrane 69.64 64.73
CDY70034 Canola cytosol, peroxisome, plasma membrane 69.64 64.73
CDX77630 Canola plasma membrane 62.05 64.06
CDY34571 Canola plasma membrane 62.05 64.06
PGSC0003DMT400081227 Potato plasma membrane 59.38 63.64
VIT_13s0106g00720.t01 Wine grape plasma membrane 58.93 62.56
Solyc02g077640.1.1 Tomato plasma membrane 57.59 61.72
KRH21356 Soybean cytosol, peroxisome, plasma membrane 56.25 59.72
CDY38243 Canola cytosol 34.82 57.35
GSMUA_Achr4P10580_001 Banana cytosol 53.12 57.21
KRH20387 Soybean plasma membrane 54.02 55.76
GSMUA_Achr4P02720_001 Banana plasma membrane 51.34 54.5
VIT_10s0003g00320.t01 Wine grape plasma membrane 58.93 53.88
KRH50120 Soybean peroxisome 45.09 48.56
TraesCS3B01G273700.1 Wheat cytosol, peroxisome, plasma membrane 40.18 48.13
KXG33079 Sorghum cytosol, endoplasmic reticulum, plasma membrane 44.64 48.08
CDY38387 Canola cytosol, endoplasmic reticulum, plasma membrane 41.52 46.5
TraesCS3D01G245600.1 Wheat cytosol, peroxisome, plasma membrane 44.2 46.26
Zm00001d011558_P001 Maize cytosol, endoplasmic reticulum, peroxisome 42.86 46.15
CDY35189 Canola cytosol, endoplasmic reticulum, plasma membrane 40.62 45.5
CDY29909 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 40.62 45.5
CDX92877 Canola cytosol, endoplasmic reticulum, plasma membrane, plastid 40.18 45.0
Os05t0562800-02 Rice plastid 47.77 44.96
TraesCS3A01G245800.1 Wheat cytosol, peroxisome, plasma membrane 43.75 44.95
HORVU1Hr1G087380.1 Barley mitochondrion 48.66 44.49
CDY24837 Canola plasma membrane, plastid 41.52 42.47
CDY03457 Canola plastid 40.18 41.67
CDY34728 Canola plasma membrane, plastid 41.07 41.63
CDY08933 Canola plasma membrane 40.62 41.18
CDY34278 Canola plasma membrane, plastid 40.18 40.91
CDY44328 Canola plasma membrane 33.04 40.0
CDY38623 Canola plasma membrane 32.14 38.92
Os06t0352200-01 Rice plasma membrane, plastid 43.3 38.34
CDY37280 Canola plasma membrane 31.25 37.84
CDY19288 Canola extracellular, plasma membrane, vacuole 31.25 37.84
CDY37281 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 32.14 35.64
CDY19287 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 31.25 34.65
CDY38622 Canola endoplasmic reticulum, plasma membrane, vacuole 31.25 34.31
CDY34726 Canola cytosol, extracellular, peroxisome 23.21 32.5
CDY44329 Canola endoplasmic reticulum, extracellular, vacuole 6.25 31.11
CDY30259 Canola plastid 18.3 30.83
CDX74441 Canola plastid 33.48 30.74
CDY56548 Canola plastid 31.7 29.34
CDX81135 Canola plastid 31.7 29.34
Protein Annotations
EnsemblPlants:CDY60883EnsemblPlantsGene:GSBRNA2T00030222001GO:A0A078J9U2GO:GO:0005575GO:GO:0016020GO:GO:0016021
InterPro:DMPPANTHER:PTHR31621PANTHER:PTHR31621:SF0PFAM:PF05078ProteinID:CDY60883ProteinID:CDY60883.1
TMHMM:TMhelixUniParc:UPI0004EBE051UniProt:A0A078J9U2MapMan:35.1::
Description
BnaC01g40900DBnaC01g40900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J9U2]
Coordinates
chrLK033926:-:26028..26702
Molecular Weight (calculated)
24586.6 Da
IEP (calculated)
4.708
GRAVY (calculated)
0.213
Length
224 amino acids
Sequence
(BLAST)
001: MNKGKSFKDM EINVVDEDHQ GSAQEEIEKP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS EIMTSVLVAI
101: CGFSCFILSF TDSYKDKNGT ICYGFATVHG FWIIDGSATL PQELSKKYKL RFIDFAHAFM SLLVFGAVVL FDRNTVNCFF PAPSAEALEV LTALPVGVGV
201: FCSMLFASFP TTRNGIGFPV PGNK
Best Arabidopsis Sequence Match ( AT4G18425.1 )
(BLAST)
001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK
Arabidopsis Description
DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.