Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 1
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025657.1-P | Field mustard | plastid | 95.49 | 52.05 |
| CDX74441 | Canola | plastid | 94.74 | 51.64 |
| CDX81135 | Canola | plastid | 84.21 | 46.28 |
| CDY56548 | Canola | plastid | 84.21 | 46.28 |
| AT1G09157.1 | Thale cress | plastid | 83.46 | 45.68 |
| VIT_14s0108g00920.t01 | Wine grape | plastid | 55.64 | 34.58 |
| KRG98781 | Soybean | plasma membrane | 52.63 | 32.71 |
| KRG98790 | Soybean | plasma membrane | 51.88 | 32.24 |
| Solyc05g007920.2.1 | Tomato | cytosol | 51.88 | 30.67 |
| PGSC0003DMT400090619 | Potato | cytosol | 51.88 | 30.26 |
| GSMUA_Achr10P... | Banana | plastid | 44.36 | 28.23 |
| Zm00001d044822_P001 | Maize | plastid | 42.11 | 27.32 |
| EER89477 | Sorghum | plastid | 42.86 | 26.89 |
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 6.77 | 20.0 |
| CDY38387 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 30.08 | 20.0 |
| CDY35189 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 29.32 | 19.5 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 30.08 | 18.69 |
| CDX92877 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 27.82 | 18.5 |
| CDY29909 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 27.82 | 18.5 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 30.83 | 18.3 |
| CDY60883 | Canola | cytosol | 30.83 | 18.3 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 29.32 | 18.22 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 29.32 | 18.22 |
| CDY34728 | Canola | plasma membrane, plastid | 28.57 | 17.19 |
| CDY24837 | Canola | plasma membrane, plastid | 27.82 | 16.89 |
| CDX77630 | Canola | plasma membrane | 27.07 | 16.59 |
| CDY34571 | Canola | plasma membrane | 27.07 | 16.59 |
| CDY33452 | Canola | plasma membrane | 27.07 | 16.59 |
| CDY08933 | Canola | plasma membrane | 26.32 | 15.84 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 28.57 | 15.77 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 28.57 | 15.77 |
| CDY34278 | Canola | plasma membrane, plastid | 25.56 | 15.45 |
| CDY03457 | Canola | plastid | 24.81 | 15.28 |
| CDY44328 | Canola | plasma membrane | 20.3 | 14.59 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 21.8 | 14.36 |
| CDY37281 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 21.8 | 14.36 |
| CDY38622 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.8 | 14.22 |
| CDY38623 | Canola | plasma membrane | 19.55 | 14.05 |
| CDY19288 | Canola | extracellular, plasma membrane, vacuole | 18.8 | 13.51 |
| CDY37280 | Canola | plasma membrane | 18.05 | 12.97 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 9.77 | 8.12 |
| CDY38243 | Canola | cytosol | 5.26 | 5.15 |
Protein Annotations
| EnsemblPlants:CDY30259 | EnsemblPlantsGene:GSBRNA2T00044898001 | GO:A0A078GYM8 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF11 | PFAM:PF05078 | ProteinID:CDY30259 | ProteinID:CDY30259.1 |
| TMHMM:TMhelix | UniParc:UPI0004EE8B8A | UniProt:A0A078GYM8 | MapMan:35.1 | : | : |
Description
BnaC04g31700DBnaC04g31700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GYM8]
Coordinates
chrLK032251:+:108332..109069
Molecular Weight (calculated)
14302.6 Da
IEP (calculated)
6.495
GRAVY (calculated)
0.226
Length
133 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKTEESVGI RVYTTATPPQ KPSPPLTHSP KPVSISSLPT LPVGAAAGGG REIPVSDDRY TLRVNDFVHA MMSVLVFMAI AFSDRRVTGC LFPGKEKEMD
101: QVMESFPLMV GIVCSALFLV FPTTCYGVGC MSA
101: QVMESFPLMV GIVCSALFLV FPTTCYGVGC MSA
001: MEKTEESVGI RVYTTTTTQN PSPTSSRSPK PVPLSSLPML PAGAAAGGGK GRKRRMVAKG VQKTVSKTSM LVNFLPTGTL LMFEMVLPTI YRDGDCNGIN
101: TLMIHLLLLL CAMSCFFFHF TDSFKASDGK IYYGFVTPRG LAVFMKPPSP GFGGGDVIAE KEIPVTDERY KLRVNDFVHS VMSVLVFMAI AFSDRRVTGC
201: LFPGKEKEMD QVMESFPLMV GIVCSALFLV FPTSRYGVGC MST
101: TLMIHLLLLL CAMSCFFFHF TDSFKASDGK IYYGFVTPRG LAVFMKPPSP GFGGGDVIAE KEIPVTDERY KLRVNDFVHS VMSVLVFMAI AFSDRRVTGC
201: LFPGKEKEMD QVMESFPLMV GIVCSALFLV FPTSRYGVGC MST
Arabidopsis Description
DMP8Protein DMP8 [Source:UniProtKB/Swiss-Prot;Acc:O80493]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.