CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 2
plasma membrane 3
plastid 1
extracellular 2
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	extracellular, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG98790	Soybean	plasma membrane	97.2	97.2
VIT_14s0108g00920.t01	Wine grape	plastid	72.43	72.43
Bra006030.1-P	Field mustard	plasma membrane	58.41	66.14
GSMUA_Achr10P...	Banana	plastid	61.68	63.16
Solyc05g007920.2.1	Tomato	cytosol	64.02	60.89
PGSC0003DMT400090619	Potato	cytosol	64.02	60.09
Bra025657.1-P	Field mustard	plastid	66.36	58.2
CDX74441	Canola	plastid	66.36	58.2
CDX81135	Canola	plastid	64.95	57.44
CDY56548	Canola	plastid	64.02	56.61
AT5G39650.1	Thale cress	plastid	64.49	56.56
AT1G09157.1	Thale cress	plastid	64.02	56.38
Zm00001d044822_P001	Maize	plastid	53.27	55.61
EER89477	Sorghum	plastid	52.8	53.3
CDY30259	Canola	plastid	32.71	52.63
KRH55890	Soybean	plasma membrane	34.58	35.75
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	35.05	35.55
KRH20387	Soybean	plasma membrane	32.71	32.26
KRH20960	Soybean	plastid	28.5	29.9
KRH50120	Soybean	peroxisome	28.5	29.33
KRH50952	Soybean	plasma membrane, plastid	28.5	27.48
KRH08569	Soybean	peroxisome	28.04	27.4
KRH02164	Soybean	endoplasmic reticulum	26.17	26.79
KRH70214	Soybean	peroxisome	27.1	26.61
KRH50953	Soybean	plastid	27.1	26.36

Protein Annotations

EntrezGene:100802901	MapMan:13.7.1.4	EMBL:ACUP02010919	InterPro:DMP	EnsemblPlantsGene:GLYMA_18G097400	GO:GO:0000003
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783
GO:GO:0007275	GO:GO:0008150	GO:GO:0009705	GO:GO:0009987	GO:GO:0010256	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0030154	GO:GO:0048235	UniProt:I1N0Q0	EnsemblPlants:KRG98781
ProteinID:KRG98781	ProteinID:KRG98781.1	PFAM:PF05078	PANTHER:PTHR31621	PANTHER:PTHR31621:SF11	TMHMM:TMhelix
UniParc:UPI000233F2B7	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr18:+:10065330..10065974

Molecular Weight (calculated)

23748.1 Da

IEP (calculated)

8.154

GRAVY (calculated)

0.179

Length

214 amino acids

Sequence
(BLAST)

001: MDLNEQQIGI KVYNNNATPP PEHETLNPSS NPPQPKKHRA LMAKGVQKTL SKTSLLGNFL PTGTLLTFEM VLPSIYKNGQ CTHVHTLMIH FLLFVCALSC
101: FFFHFTDSFH GPDGAVYYGF VTPRGLAVFK PAVAVPEDDR FKVGFTDFVH AVMSVMVFVA IAISDHRVTN CLFPGKDKDM EQVRESFPLM VGIVCSGLFL
201: VFPTFRRGIG CMSA

Best Arabidopsis Sequence Match ( AT1G09157.1 )
(BLAST)

001: MEKTEESVGI RVYTTTTTQN PSPTSSRSPK PVPLSSLPML PAGAAAGGGK GRKRRMVAKG VQKTVSKTSM LVNFLPTGTL LMFEMVLPTI YRDGDCNGIN
101: TLMIHLLLLL CAMSCFFFHF TDSFKASDGK IYYGFVTPRG LAVFMKPPSP GFGGGDVIAE KEIPVTDERY KLRVNDFVHS VMSVLVFMAI AFSDRRVTGC
201: LFPGKEKEMD QVMESFPLMV GIVCSALFLV FPTSRYGVGC MST

Arabidopsis Description

DMP8Protein DMP8 [Source:UniProtKB/Swiss-Prot;Acc:O80493]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.