CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
plasma membrane 1
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50952	Soybean	plasma membrane, plastid	73.18	72.52
KRH02164	Soybean	endoplasmic reticulum	65.91	69.38
VIT_05s0020g02280.t01	Wine grape	plastid	52.27	59.9
KRH20960	Soybean	plastid	52.27	56.37
AT3G21550.1	Thale cress	plasma membrane	46.36	55.43
CDY37280	Canola	plasma membrane	46.36	55.14
Bra023874.1-P	Field mustard	plasma membrane	45.91	54.59
CDY38623	Canola	plasma membrane	45.91	54.59
Bra031289.1-P	Field mustard	plasma membrane	45.91	54.59
CDY44328	Canola	plasma membrane	45.0	53.51
CDY19288	Canola	extracellular, plasma membrane, vacuole	45.0	53.51
PGSC0003DMT400081771	Potato	extracellular	40.0	50.57
Solyc01g080490.2.1	Tomato	extracellular	39.55	50.0
EER94799	Sorghum	plasma membrane	43.64	49.74
GSMUA_Achr11P...	Banana	plasma membrane	44.09	49.24
HORVU7Hr1G100090.1	Barley	plasma membrane	43.18	49.22
TraesCS7B01G337100.1	Wheat	plasma membrane	43.18	49.22
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	43.18	49.22
Zm00001d047420_P001	Maize	plasma membrane	41.82	48.94
Os03t0370400-01	Rice	plastid	42.73	48.7
TraesCS7D01G428000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	34.55	45.51
KRH55890	Soybean	plasma membrane	32.27	34.3
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	32.27	33.65
KRH20387	Soybean	plasma membrane	32.73	33.18
KRH70214	Soybean	peroxisome	29.09	29.36
KRH08569	Soybean	peroxisome	29.09	29.22
KRH50120	Soybean	peroxisome	25.91	27.4
KRG98781	Soybean	plasma membrane	26.36	27.1
KRG98790	Soybean	plasma membrane	25.45	26.17

Protein Annotations

EntrezGene:100819528	MapMan:35.1	EMBL:ACUP02004720	InterPro:DMP	EnsemblPlantsGene:GLYMA_07G253600	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0008150
GO:GO:0009705	GO:GO:0009987	GO:GO:0010256	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043
UniProt:K7L3S9	EnsemblPlants:KRH50953	ProteinID:KRH50953	ProteinID:KRH50953.1	PFAM:PF05078	PANTHER:PTHR31621
PANTHER:PTHR31621:SF1	TMHMM:TMhelix	UniParc:UPI0002338ED0	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr7:+:43070340..43071436

Molecular Weight (calculated)

23427.7 Da

IEP (calculated)

6.943

GRAVY (calculated)

0.111

Length

220 amino acids

Sequence
(BLAST)

001: MNANSSSMST NTQTQPLLGT GVSVTNTNTS PFSAVGSFIK LLPTGTLFVF QFLNPVLTNS GECNASNKWL SGILLVACGF SCAFSSFTDS YTGSDNQRHY
101: GIVTTKGLWP SPASESVDLS TYRLKFGDFV HAVLSLLVFA VLGLLDTNTV HCLYPGFEST QRLLLQVLPT VIGVLAGGHF VISPSNRHGI GYPLTSDSNT
201: TSPELNHTTA PPQHPNHTSV

Best Arabidopsis Sequence Match ( AT3G21550.1 )
(BLAST)

001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK

Arabidopsis Description

DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.