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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 3
  • endoplasmic reticulum 1
  • golgi 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:endoplasmic reticulum, golgi, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:golgi, plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G428000.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 84.46 97.6
TraesCS7A01G438100.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 97.41 97.41
TraesCS7B01G337100.1 Wheat plasma membrane 96.37 96.37
Os03t0370400-01 Rice plastid 89.64 89.64
EER94799 Sorghum plasma membrane 83.94 83.94
Zm00001d047420_P001 Maize plasma membrane 79.79 81.91
GSMUA_Achr6P08370_001 Banana cytosol, endoplasmic reticulum, plasma membrane 56.48 56.19
VIT_05s0020g02280.t01 Wine grape plastid 50.78 51.04
KRH20960 Soybean plastid 51.3 48.53
PGSC0003DMT400081771 Potato extracellular 43.52 48.28
Solyc01g080490.2.1 Tomato extracellular 43.01 47.7
Bra031289.1-P Field mustard plasma membrane 44.56 46.49
CDY38623 Canola plasma membrane 44.56 46.49
CDY44328 Canola plasma membrane 44.56 46.49
AT3G21550.1 Thale cress plasma membrane 43.52 45.65
Bra023874.1-P Field mustard plasma membrane 43.52 45.41
CDY19288 Canola extracellular, plasma membrane, vacuole 43.52 45.41
CDY37280 Canola plasma membrane 43.52 45.41
KRH02164 Soybean endoplasmic reticulum 47.15 43.54
KRH50953 Soybean plastid 49.22 43.18
KRH50952 Soybean plasma membrane, plastid 48.7 42.34
HORVU5Hr1G034760.1 Barley plasma membrane 22.28 39.45
HORVU2Hr1G025080.1 Barley cytosol, peroxisome, vacuole 42.49 38.68
HORVU6Hr1G022610.1 Barley plasma membrane 38.34 34.91
HORVU1Hr1G067430.1 Barley mitochondrion 37.31 31.72
HORVU7Hr1G077620.2 Barley plastid 39.38 31.28
HORVU1Hr1G087380.1 Barley mitochondrion 39.38 31.02
HORVU7Hr1G119740.2 Barley plasma membrane 32.64 30.29
HORVU6Hr1G090450.1 Barley plastid 34.2 28.82
HORVU2Hr1G027720.1 Barley mitochondrion, plastid 33.16 28.19
HORVU6Hr1G090420.1 Barley cytosol, plasma membrane, plastid, vacuole 35.23 27.31
HORVU6Hr1G090460.1 Barley plastid 34.2 27.16
HORVU7Hr1G110570.1 Barley cytosol, peroxisome, plastid 33.68 26.21
HORVU7Hr1G119710.1 Barley cytosol, plasma membrane, plastid 31.61 25.74
HORVU5Hr1G118360.1 Barley cytosol, peroxisome, plasma membrane 30.57 25.0
HORVU7Hr1G119790.1 Barley cytosol, vacuole 33.68 24.62
Protein Annotations
EMBL:AK366877EnsemblPlants:HORVU7Hr1G100090.1EnsemblPlantsGene:HORVU7Hr1G100090InterPro:DMPPANTHER:PTHR31621PANTHER:PTHR31621:SF26
PFAM:PF05078SEG:segUniParc:UPI0002006EA1UniProt:F2DSK9MapMan:35.1:
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2DSK9]
Coordinates
chrchr7H:+:603296768..603298096
Molecular Weight (calculated)
20689.0 Da
IEP (calculated)
8.613
GRAVY (calculated)
0.239
Length
193 amino acids
Sequence
(BLAST)
001: MAAPAARSVG VAERALRGVA DLIKLLPSGT VFMFQFLSPL VTNNGHCAAY NKVLSGALLA LCGAFCAFSS FTDSYVGSDG RVYYGVVTRR GMRTFSADPD
101: AGAARDLSGY RLRAGDFVHA ALSLMVFATL ALLDRDTVSC LYPAMEASER TMMAVLPPVV GGVASYAFMM FPNNRHGIGY QPTRATEDFQ HKH
Best Arabidopsis Sequence Match ( AT3G21550.1 )
(BLAST)
001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK
Arabidopsis Description
DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.