Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G119710.1 | Barley | cytosol, plasma membrane, plastid | 67.37 | 67.09 |
| HORVU7Hr1G119790.1 | Barley | cytosol, vacuole | 70.76 | 63.26 |
| HORVU7Hr1G119740.2 | Barley | plasma membrane | 48.73 | 55.29 |
| HORVU6Hr1G090450.1 | Barley | plastid | 43.22 | 44.54 |
| HORVU6Hr1G090460.1 | Barley | plastid | 41.53 | 40.33 |
| HORVU7Hr1G110570.1 | Barley | cytosol, peroxisome, plastid | 41.95 | 39.92 |
| HORVU6Hr1G090420.1 | Barley | cytosol, plasma membrane, plastid, vacuole | 39.83 | 37.75 |
| HORVU1Hr1G067430.1 | Barley | mitochondrion | 35.17 | 36.56 |
| HORVU6Hr1G022610.1 | Barley | plasma membrane | 32.63 | 36.32 |
| AT5G27370.1 | Thale cress | plasma membrane | 26.27 | 32.46 |
| HORVU2Hr1G027720.1 | Barley | mitochondrion, plastid | 30.51 | 31.72 |
| HORVU2Hr1G025080.1 | Barley | cytosol, peroxisome, vacuole | 27.54 | 30.66 |
| HORVU7Hr1G100090.1 | Barley | plasma membrane | 25.0 | 30.57 |
| HORVU5Hr1G034760.1 | Barley | plasma membrane | 13.14 | 28.44 |
| HORVU7Hr1G077620.2 | Barley | plastid | 28.39 | 27.57 |
| HORVU1Hr1G087380.1 | Barley | mitochondrion | 27.97 | 26.94 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 35.59 | 19.0 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G118360.1 | EnsemblPlantsGene:HORVU5Hr1G118360 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DMP |
| PANTHER:PTHR31621 | PFAM:PF05078 | TMHMM:TMhelix | UniParc:UPI000B46D36E | UniProt:A0A287SWQ5 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr5H:-:652492867..652493752
Molecular Weight (calculated)
25375.8 Da
IEP (calculated)
8.394
GRAVY (calculated)
0.126
Length
236 amino acids
Sequence
(BLAST)
(BLAST)
001: MASGPEAGNG APPDTEAGKG APKALAEKTP VTQKVLSVSA NLVQLLPTGS VMAYQMLAPS FSNQGKCYPS NWWITLGLVV LLASSCIFFA FTDSIVHNGK
101: VYYGLATFKR LNIFNINKTE EKQLFVDILP ELKKRGLKKQ DFVHAILTCV VFLTMACSDV GLQNCFFPNA GTDAQQLLKN LPLGMAVFSS LVFTIFPTKR
201: NFIGCTEPNV SKDASETHDP STASSRPVCT LCGAQG
101: VYYGLATFKR LNIFNINKTE EKQLFVDILP ELKKRGLKKQ DFVHAILTCV VFLTMACSDV GLQNCFFPNA GTDAQQLLKN LPLGMAVFSS LVFTIFPTKR
201: NFIGCTEPNV SKDASETHDP STASSRPVCT LCGAQG
001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
Arabidopsis Description
DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.