Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G427400.1 | Wheat | plastid | 86.01 | 91.67 |
| TraesCS6D01G372300.1 | Wheat | plastid | 85.19 | 88.09 |
| HORVU6Hr1G090450.1 | Barley | plastid | 79.42 | 84.28 |
| KXG19680 | Sorghum | plastid | 62.96 | 62.7 |
| OQU76129 | Sorghum | plastid | 58.44 | 62.56 |
| HORVU7Hr1G110570.1 | Barley | cytosol, peroxisome, plastid | 63.79 | 62.5 |
| Os01t0389700-01 | Rice | plastid | 58.02 | 58.75 |
| Zm00001d044777_P001 | Maize | plastid | 60.08 | 57.25 |
| HORVU6Hr1G090420.1 | Barley | cytosol, plasma membrane, plastid, vacuole | 55.97 | 54.62 |
| Os01t0389200-01 | Rice | cytosol | 55.14 | 50.76 |
| HORVU6Hr1G022610.1 | Barley | plasma membrane | 40.74 | 46.7 |
| HORVU7Hr1G119710.1 | Barley | cytosol, plasma membrane, plastid | 42.39 | 43.46 |
| HORVU1Hr1G067430.1 | Barley | mitochondrion | 40.33 | 43.17 |
| HORVU7Hr1G119740.2 | Barley | plasma membrane | 35.8 | 41.83 |
| HORVU5Hr1G118360.1 | Barley | cytosol, peroxisome, plasma membrane | 40.33 | 41.53 |
| HORVU7Hr1G119790.1 | Barley | cytosol, vacuole | 44.86 | 41.29 |
| HORVU2Hr1G027720.1 | Barley | mitochondrion, plastid | 35.39 | 37.89 |
| AT5G27370.1 | Thale cress | plasma membrane | 28.81 | 36.65 |
| HORVU7Hr1G100090.1 | Barley | plasma membrane | 27.16 | 34.2 |
| HORVU7Hr1G077620.2 | Barley | plastid | 33.74 | 33.74 |
| HORVU5Hr1G034760.1 | Barley | plasma membrane | 14.4 | 32.11 |
| HORVU2Hr1G025080.1 | Barley | cytosol, peroxisome, vacuole | 27.98 | 32.08 |
| HORVU1Hr1G087380.1 | Barley | mitochondrion | 28.81 | 28.57 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 42.39 | 23.3 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G090460.1 | EnsemblPlantsGene:HORVU6Hr1G090460 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:DMP |
| PANTHER:PTHR31621 | PFAM:PF05078 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B476A90 | UniProt:A0A287V544 |
| MapMan:35.1 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:572514719..572515677
Molecular Weight (calculated)
26541.8 Da
IEP (calculated)
8.501
GRAVY (calculated)
0.067
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: SIAPLRSRTH IKKSTPTMAS SSSPPSTTIQ IHPLTTGEIT TASTAPPTPS TGPASATVMS SVANLAQLLP TGTVLAYQAL SPSFTNHGKC ETSNQWLTGV
101: LVIVLAVSCL FFSFTDSVVG RRDGKLYYGF ATLHGFNVFN FSSEEERQEW DDLDQFRRLR LRPLDFVHAF FAAMVFLTVA FSDVGLQNCF FQDAGRNTEE
201: LLKNLPMGMA FLSSFVFIIL PTKRKGIGFS DTAPPQKVVH PLN
101: LVIVLAVSCL FFSFTDSVVG RRDGKLYYGF ATLHGFNVFN FSSEEERQEW DDLDQFRRLR LRPLDFVHAF FAAMVFLTVA FSDVGLQNCF FQDAGRNTEE
201: LLKNLPMGMA FLSSFVFIIL PTKRKGIGFS DTAPPQKVVH PLN
001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
Arabidopsis Description
DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.