Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 1
- extracellular 2
- plasma membrane 4
- golgi 2
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G113300.1 | Wheat | plastid | 94.34 | 93.02 |
| TraesCS6B01G151400.1 | Wheat | cytosol, peroxisome, plasma membrane | 94.34 | 92.59 |
| TraesCS6A01G123100.1 | Wheat | plastid | 91.98 | 90.7 |
| TraesCS6D01G113400.1 | Wheat | plastid | 89.62 | 88.78 |
| Zm00001d008235_P001 | Maize | golgi, peroxisome, plasma membrane | 75.47 | 70.48 |
| KXG32269 | Sorghum | cytosol, peroxisome, plasma membrane | 75.47 | 69.26 |
| HORVU1Hr1G067430.1 | Barley | mitochondrion | 72.17 | 67.4 |
| HORVU2Hr1G027720.1 | Barley | mitochondrion, plastid | 62.74 | 58.59 |
| GSMUA_AchrUn_... | Banana | plastid | 50.47 | 54.31 |
| HORVU6Hr1G090450.1 | Barley | plastid | 46.7 | 43.23 |
| HORVU7Hr1G110570.1 | Barley | cytosol, peroxisome, plastid | 49.53 | 42.34 |
| HORVU6Hr1G090460.1 | Barley | plastid | 46.7 | 40.74 |
| AT5G27370.1 | Thale cress | plasma membrane | 36.32 | 40.31 |
| HORVU7Hr1G119740.2 | Barley | plasma membrane | 37.74 | 38.46 |
| HORVU7Hr1G100090.1 | Barley | plasma membrane | 34.91 | 38.34 |
| HORVU5Hr1G034760.1 | Barley | plasma membrane | 18.4 | 35.78 |
| HORVU6Hr1G090420.1 | Barley | cytosol, plasma membrane, plastid, vacuole | 41.04 | 34.94 |
| HORVU2Hr1G025080.1 | Barley | cytosol, peroxisome, vacuole | 34.43 | 34.43 |
| HORVU7Hr1G119710.1 | Barley | cytosol, plasma membrane, plastid | 37.26 | 33.33 |
| HORVU5Hr1G118360.1 | Barley | cytosol, peroxisome, plasma membrane | 36.32 | 32.63 |
| HORVU7Hr1G077620.2 | Barley | plastid | 37.26 | 32.51 |
| HORVU7Hr1G119790.1 | Barley | cytosol, vacuole | 37.74 | 30.3 |
| HORVU1Hr1G087380.1 | Barley | mitochondrion | 33.96 | 29.39 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G022610.1 | EnsemblPlantsGene:HORVU6Hr1G022610 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF2 | PFAM:PF05078 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI0002949CDE | UniProt:M0UUZ6 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chrchr6H:-:72243314..72244543
Molecular Weight (calculated)
22658.3 Da
IEP (calculated)
6.500
GRAVY (calculated)
0.307
Length
212 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPISNAVHI QMQQSSPHEA PPQTGFPPAD KTLSSASDLL KLLPTGTVLA FQALAPSFSS NHGVCHAANR YLVLALIGGC AASCVLLSFT DSLVGRDGRL
101: YYGAATFGGF YPFNFTGTRA ERDAVFKDLS RFRVTPMDFV HAVVSALVFL AVAFADAGIQ GCLFPEGGTE TDLRELLVNL PVAAGFLASM VFMIFPTTRK
201: SIGYTDMMPH SQ
101: YYGAATFGGF YPFNFTGTRA ERDAVFKDLS RFRVTPMDFV HAVVSALVFL AVAFADAGIQ GCLFPEGGTE TDLRELLVNL PVAAGFLASM VFMIFPTTRK
201: SIGYTDMMPH SQ
001: MEKTEESVGI RVYTATPPQK PSPSPPSRSP KPVLISSLPS LPSGAAAGGG RGRKRRMVAQ GVQKTVSKTS MLVNFLPTGT LLMFEMVLPS IYRDGDCNGI
101: NTLMIHLLLL LCAMSCFFFH FTDSFKASDG KIYYGFVTPR GLAVFMKPPP PEFGGGDVIA EAEIPVTDDR YKLTVNDFVH AVMSVLVFMA IAFSDRRVTG
201: CLFPGKEKEM DQVMESFPIM VGIVCSALFL VFPTTRYGVG CMTG
101: NTLMIHLLLL LCAMSCFFFH FTDSFKASDG KIYYGFVTPR GLAVFMKPPP PEFGGGDVIA EAEIPVTDDR YKLTVNDFVH AVMSVLVFMA IAFSDRRVTG
201: CLFPGKEKEM DQVMESFPIM VGIVCSALFL VFPTTRYGVG CMTG
Arabidopsis Description
DMP9Protein DMP9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK96]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.