Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G113300.1 | Wheat | plastid | 96.3 | 96.74 |
| TraesCS6A01G123100.1 | Wheat | plastid | 94.91 | 95.35 |
| HORVU6Hr1G022610.1 | Barley | plasma membrane | 92.59 | 94.34 |
| KXG32269 | Sorghum | cytosol, peroxisome, plasma membrane | 75.0 | 70.13 |
| Zm00001d008235_P001 | Maize | golgi, peroxisome, plasma membrane | 72.69 | 69.16 |
| TraesCS2B01G179200.1 | Wheat | cytosol, peroxisome, vacuole | 70.83 | 67.4 |
| GSMUA_AchrUn_... | Banana | plastid | 48.61 | 53.3 |
| TraesCS7B01G034700.1 | Wheat | plastid | 47.69 | 46.19 |
| TraesCS6B01G427600.1 | Wheat | plastid | 47.22 | 44.93 |
| TraesCS6B01G427400.1 | Wheat | plastid | 47.22 | 44.74 |
| TraesCS2B01G068300.1 | Wheat | plastid | 47.22 | 44.54 |
| TraesCS7B01G024200.1 | Wheat | cytosol, peroxisome, plastid, vacuole | 50.93 | 44.53 |
| TraesCS7B01G024300.1 | Wheat | plastid | 47.69 | 44.21 |
| TraesCS7B01G399300.1 | Wheat | cytosol, peroxisome, plasma membrane | 50.0 | 44.08 |
| TraesCS2B01G068400.1 | Wheat | plastid | 44.91 | 43.5 |
| TraesCS2B01G068500.1 | Wheat | plastid | 45.83 | 43.23 |
| TraesCS6B01G427700.1 | Wheat | plastid | 48.61 | 43.21 |
| TraesCS6B01G427800.1 | Wheat | plastid | 44.44 | 41.56 |
| TraesCS6B01G427300.1 | Wheat | plastid | 43.98 | 41.48 |
| AT5G27370.1 | Thale cress | plasma membrane | 34.72 | 39.27 |
| TraesCS7B01G499200.1 | Wheat | vacuole | 37.5 | 39.13 |
| TraesCS7B01G337100.1 | Wheat | plasma membrane | 33.8 | 37.82 |
| TraesCS7B01G497700.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.57 | 37.09 |
| TraesCS4B01G141000.1 | Wheat | plastid | 35.19 | 36.72 |
| TraesCS6B01G469800.1 | Wheat | plastid | 40.74 | 35.63 |
| TraesCS7B01G225000.1 | Wheat | plastid | 37.04 | 35.24 |
| TraesCS3B01G273700.1 | Wheat | cytosol, peroxisome, plasma membrane | 30.09 | 34.76 |
| TraesCS2B01G166900.1 | Wheat | cytosol, plasma membrane, vacuole | 34.26 | 34.74 |
| TraesCS7B01G499800.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 38.89 | 34.43 |
| TraesCS7B01G498800.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 37.04 | 33.9 |
| TraesCS6B01G427500.1 | Wheat | plasma membrane | 39.35 | 33.6 |
| TraesCS1B01G424300.1 | Wheat | plasma membrane | 33.8 | 33.18 |
| TraesCS7B01G498900.1 | Wheat | plastid | 36.57 | 32.92 |
| TraesCS3B01G440900.1 | Wheat | plasma membrane | 30.56 | 29.73 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G151400.1 | EnsemblPlantsGene:TraesCS6B01G151400 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF2 | PFAM:PF05078 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6B:-:152630520..152631170
Molecular Weight (calculated)
22871.7 Da
IEP (calculated)
6.497
GRAVY (calculated)
0.317
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPVSNAVHI QMPPEPAQQS SPHEAPPQTG VLPPADKTLS SASDLLKLLP TGTVLAFQAL APSFSNNHGV CHAANRCLIL ALVGGCAASC VLLSFTDSLV
101: GRDGRLYYGA ATLGGFYPFN FTGTRAERDA VFKDLSRFRV TPMDLVHAVV SALVFLAVAF ADAGIQGCLF PDAGTETREL LVNLPVAAGF LASMVFMIFP
201: TTRKSIGYTD MMPHSQ
101: GRDGRLYYGA ATLGGFYPFN FTGTRAERDA VFKDLSRFRV TPMDLVHAVV SALVFLAVAF ADAGIQGCLF PDAGTETREL LVNLPVAAGF LASMVFMIFP
201: TTRKSIGYTD MMPHSQ
001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR
Arabidopsis Description
DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.