Factsheet for TraesCS7B01G024200.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, vacuole, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G479400.1	Wheat	cytosol, peroxisome, plasma membrane	89.07	89.8
TraesCS7B01G399300.1	Wheat	cytosol, peroxisome, plasma membrane	88.26	88.98
HORVU7Hr1G110570.1	Barley	cytosol, peroxisome, plastid	86.23	85.89
TraesCS7B01G024300.1	Wheat	plastid	77.33	81.97
TraesCS7B01G034700.1	Wheat	plastid	72.47	80.27
TraesCS2B01G068400.1	Wheat	plastid	61.94	68.61
OQU76129	Sorghum	plastid	62.75	68.28
TraesCS6B01G427400.1	Wheat	plastid	61.94	67.11
TraesCS6B01G427600.1	Wheat	plastid	61.13	66.52
TraesCS2B01G068300.1	Wheat	plastid	61.54	66.38
TraesCS6B01G427800.1	Wheat	plastid	61.94	66.23
KXG19680	Sorghum	plastid	65.18	65.98
TraesCS2B01G068500.1	Wheat	plastid	60.73	65.5
TraesCS6B01G427300.1	Wheat	plastid	59.92	64.63
TraesCS6B01G427700.1	Wheat	plastid	63.56	64.61
Zm00001d044777_P001	Maize	plastid	64.37	62.35
Os01t0389700-01	Rice	plastid	58.7	60.42
Os01t0389200-01	Rice	cytosol	59.92	56.06
TraesCS6B01G427500.1	Wheat	plasma membrane	53.44	52.17
TraesCS6B01G151400.1	Wheat	cytosol, peroxisome, plasma membrane	44.53	50.93
TraesCS2B01G179200.1	Wheat	cytosol, peroxisome, vacuole	43.72	47.58
TraesCS7B01G499200.1	Wheat	vacuole	38.46	45.89
TraesCS7B01G497700.1	Wheat	cytosol, peroxisome, plasma membrane	38.46	44.6
TraesCS7B01G498800.1	Wheat	cytosol, plasma membrane, plastid, vacuole	42.51	44.49
TraesCS7B01G499800.1	Wheat	endoplasmic reticulum, peroxisome, vacuole	41.3	41.8
TraesCS7B01G498900.1	Wheat	plastid	39.68	40.83
AT5G27370.1	Thale cress	plasma membrane	27.53	35.6
TraesCS6B01G469800.1	Wheat	plastid	35.22	35.22
TraesCS7B01G225000.1	Wheat	plastid	31.17	33.92
TraesCS7B01G337100.1	Wheat	plasma membrane	26.32	33.68
TraesCS2B01G166900.1	Wheat	cytosol, plasma membrane, vacuole	28.74	33.33
TraesCS4B01G141000.1	Wheat	plastid	27.53	32.85
TraesCS1B01G424300.1	Wheat	plasma membrane	28.74	32.27
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	23.89	31.55
TraesCS3B01G440900.1	Wheat	plasma membrane	26.72	29.73
GSMUA_Achr5P26860_001	Banana	plasma membrane	42.51	23.76

Protein Annotations

EnsemblPlants:TraesCS7B01G024200.1	EnsemblPlantsGene:TraesCS7B01G024200	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF24	PFAM:PF05078
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr7B:-:23317200..23317943

Molecular Weight (calculated)

26670.1 Da

IEP (calculated)

8.844

GRAVY (calculated)

0.115

Length

247 amino acids

Sequence
(BLAST)

001: MEQLRTFLID HTMASSSPSS TVIQMPPSPH TNGGTAGLAP ATPKDAGDIP TTASATAAGP AASATDKVMS SAANLAQLLP TGTVLAYQAL SPSFTNHGKC
101: FSSNQWLTAA LVLVLTISCV LFSFTDSVLG RDQKLYYGIA TPRGFNVFNF SDEEEKLQWT PAEFRRLRIR PLDFMRAVFT ALVFLTVALS DVGLQNCFFP
201: NAGMNTQELL KNLPLGIAFL SSFVFMIFPT KRKGIGYSDT TPRQKLT

Best Arabidopsis Sequence Match ( AT3G02430.1 )
(BLAST)

001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR

Arabidopsis Description

DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.