Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G388600.1 | Wheat | cytosol, plasma membrane, plastid | 91.63 | 91.63 |
| TraesCS6B01G427300.1 | Wheat | plastid | 81.94 | 81.22 |
| TraesCS2B01G068500.1 | Wheat | plastid | 73.13 | 72.49 |
| TraesCS6B01G427800.1 | Wheat | plastid | 73.57 | 72.29 |
| TraesCS2B01G068300.1 | Wheat | plastid | 72.69 | 72.05 |
| TraesCS6B01G427400.1 | Wheat | plastid | 72.25 | 71.93 |
| TraesCS2B01G068400.1 | Wheat | plastid | 69.16 | 70.4 |
| TraesCS6B01G427700.1 | Wheat | plastid | 75.33 | 70.37 |
| OQU76129 | Sorghum | plastid | 63.88 | 63.88 |
| KXG19680 | Sorghum | plastid | 66.08 | 61.48 |
| TraesCS7B01G024200.1 | Wheat | cytosol, peroxisome, plastid, vacuole | 66.52 | 61.13 |
| TraesCS7B01G024300.1 | Wheat | plastid | 61.67 | 60.09 |
| TraesCS7B01G034700.1 | Wheat | plastid | 57.71 | 58.74 |
| TraesCS7B01G399300.1 | Wheat | cytosol, peroxisome, plasma membrane | 63.0 | 58.37 |
| Os01t0389700-01 | Rice | plastid | 61.67 | 58.33 |
| Zm00001d044777_P001 | Maize | plastid | 61.67 | 54.9 |
| Os01t0389200-01 | Rice | cytosol | 59.91 | 51.52 |
| TraesCS6B01G427500.1 | Wheat | plasma membrane | 55.07 | 49.41 |
| TraesCS6B01G151400.1 | Wheat | cytosol, peroxisome, plasma membrane | 44.93 | 47.22 |
| TraesCS2B01G179200.1 | Wheat | cytosol, peroxisome, vacuole | 45.37 | 45.37 |
| TraesCS7B01G499800.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 45.81 | 42.62 |
| TraesCS7B01G497700.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.65 | 42.25 |
| TraesCS7B01G499200.1 | Wheat | vacuole | 38.33 | 42.03 |
| TraesCS7B01G498800.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 42.73 | 41.1 |
| TraesCS7B01G498900.1 | Wheat | plastid | 43.17 | 40.83 |
| AT5G27370.1 | Thale cress | plasma membrane | 31.28 | 37.17 |
| TraesCS7B01G225000.1 | Wheat | plastid | 35.24 | 35.24 |
| TraesCS7B01G337100.1 | Wheat | plasma membrane | 29.96 | 35.23 |
| TraesCS6B01G469800.1 | Wheat | plastid | 35.68 | 32.79 |
| TraesCS2B01G166900.1 | Wheat | cytosol, plasma membrane, vacuole | 29.52 | 31.46 |
| TraesCS4B01G141000.1 | Wheat | plastid | 27.31 | 29.95 |
| TraesCS1B01G424300.1 | Wheat | plasma membrane | 27.75 | 28.64 |
| TraesCS3B01G273700.1 | Wheat | cytosol, peroxisome, plasma membrane | 23.35 | 28.34 |
| TraesCS3B01G440900.1 | Wheat | plasma membrane | 26.43 | 27.03 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 46.7 | 23.98 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G427600.1 | EnsemblPlantsGene:TraesCS6B01G427600 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF24 | PFAM:PF05078 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6B:+:696079888..696080571
Molecular Weight (calculated)
24739.7 Da
IEP (calculated)
6.775
GRAVY (calculated)
0.053
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSSPSPTA IQMPPPTATK EVDDGGEITT AGTAPPTSTP TMDRIMSSVT NLAQLLPTGT VLAYQALSPS FTNHGKCEAS NQWLTVALVA VLVVMCLFFS
101: FTDSLVGRDG KLYYGIAMPR GFNVFNFPGE DESREWGGGE LRSLRLRPLD FVHSFFAAVV FLTVVFSDVG LQNCFFPDAN RNTQELLKNL PLGMAFLSGF
201: VFTIFPTKRK GIGFSDNTPR RKVDHLN
101: FTDSLVGRDG KLYYGIAMPR GFNVFNFPGE DESREWGGGE LRSLRLRPLD FVHSFFAAVV FLTVVFSDVG LQNCFFPDAN RNTQELLKNL PLGMAFLSGF
201: VFTIFPTKRK GIGFSDNTPR RKVDHLN
001: MSSPSSLTQR NPTSSQEQSE SVPQLRRQTS QHAVMSQTLT SAANLANLLP TGTLLAFTLL IPVFTSNGSC DYPTQVLTIV LLTLLSISCF LSSFTDSVKA
101: EDGNVYYGFA TRKGMWVFDY PDPDGLGLPN LSKYRIRIID WIHAVLSVLV FGAVALRDKN AVSCFYPAPE QETKKVLDIV PMGVGVICGM LFLVFPARRH
201: GIGYPVTGDG GRR
101: EDGNVYYGFA TRKGMWVFDY PDPDGLGLPN LSKYRIRIID WIHAVLSVLV FGAVALRDKN AVSCFYPAPE QETKKVLDIV PMGVGVICGM LFLVFPARRH
201: GIGYPVTGDG GRR
Arabidopsis Description
DMP3Protein DMP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STW3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.