Factsheet for TraesCS6A01G388600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, plastid
Any Predictor:	cytosol, plasma membrane, plastid
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G427600.1	Wheat	plastid	91.63	91.63
TraesCS6A01G388100.1	Wheat	plastid	84.58	83.84
TraesCS2A01G055600.1	Wheat	plastid	73.57	72.93
TraesCS2A01G055500.1	Wheat	endoplasmic reticulum, plasma membrane	60.35	71.73
TraesCS6A01G388800.1	Wheat	plastid	71.37	70.13
TraesCS6A01G388700.1	Wheat	plastid	74.01	69.42
TraesCS6A01G388200.1	Wheat	plastid	69.6	69.3
TraesCS2A01G055400.1	Wheat	plastid	73.13	68.59
TraesCS2A01G055300.1	Wheat	plastid	68.72	67.83
OQU76129	Sorghum	plastid	65.2	65.2
TraesCS7A01G133600.1	Wheat	plastid	65.2	62.98
KXG19680	Sorghum	plastid	66.08	61.48
Os01t0389700-01	Rice	plastid	62.56	59.17
Zm00001d044777_P001	Maize	plastid	61.23	54.51
Os01t0389200-01	Rice	cytosol	59.91	51.52
TraesCS6A01G388300.1	Wheat	plasma membrane	56.39	51.2
TraesCS2A01G153900.1	Wheat	cytosol, peroxisome, vacuole	46.7	49.77
TraesCS6A01G123100.1	Wheat	plastid	44.49	46.98
TraesCS7A01G563500.1	Wheat	cytosol, plasma membrane, vacuole	37.89	41.75
AT5G27370.1	Thale cress	plasma membrane	30.84	36.65
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	30.84	36.27
TraesCS7A01G324500.1	Wheat	plastid	35.68	35.68
TraesCS2A01G141700.1	Wheat	cytosol, peroxisome, vacuole	30.4	32.7
TraesCS5A01G470700.1	Wheat	cytosol, golgi, peroxisome	35.68	32.02
TraesCS4A01G176900.1	Wheat	cytosol, peroxisome, plastid, vacuole	26.87	29.47
TraesCS1A01G395800.1	Wheat	plasma membrane	28.19	28.96
TraesCS3A01G407300.1	Wheat	plasma membrane	27.31	27.93
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	24.67	25.69
GSMUA_Achr5P26860_001	Banana	plasma membrane	47.14	24.21

Protein Annotations

EnsemblPlants:TraesCS6A01G388600.1	EnsemblPlantsGene:TraesCS6A01G388600	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF24	PFAM:PF05078
SEG:seg	TMHMM:TMhelix	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr6A:+:604537512..604538195

Molecular Weight (calculated)

24965.8 Da

IEP (calculated)

4.801

GRAVY (calculated)

0.022

Length

227 amino acids

Sequence
(BLAST)

001: MATSSPSPTV IQMPPPTATK DVDDDGEITP AGTEPPTATP TMDRVMSSVT NLAQLLPTGT VLAYQALSPS FTNHGKCEAS NQWLTVALVA ILVVMCLFFS
101: FTDSLVGRDG KLYYGVAAPR GFNVFNFPGE DENREWDRDE LWSLRLRPLD FVHSFFAAVV FLTVVFSDVG LQNCFFPDAN RNTQELLKNL PLGMAFLSTF
201: VFTIFPTKRK GIGFSDNTPG RKVDHSI

Best Arabidopsis Sequence Match ( AT5G27370.1 )
(BLAST)

001: MEASFIRSLP SAGNFANLLP TGTALIFETL LPSFSNGGEC NNKPVNKLLT ITLISFCAAA CFFSSFTDSY VGQDGRIYYG IATSNGLHIL NDYPDEGYDP
101: ESGLTADKRE RYKLSFVDFV HAFVSVIVFL ALAVESSDFR RCLLPEDDEN SWGGHFVLMI KYFAVMVLTM ASFFFAIFPS KRRGIGISDI R

Arabidopsis Description

DMP10Protein DMP10 [Source:UniProtKB/Swiss-Prot;Acc:Q3E912]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.