Factsheet for TraesCS2A01G055600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

endoplasmic reticulum 1
mitochondrion 1
plastid 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	endoplasmic reticulum, plasma membrane, plastid
MultiLoc:	endoplasmic reticulum
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G068500.1	Wheat	plastid	95.63	95.63
TraesCS2A01G055400.1	Wheat	plastid	97.38	92.15
TraesCS2D01G054300.1	Wheat	plastid	91.7	86.78
TraesCS2A01G055500.1	Wheat	endoplasmic reticulum, plasma membrane	69.43	83.25
TraesCS6A01G388700.1	Wheat	plastid	85.15	80.58
TraesCS2A01G055300.1	Wheat	plastid	79.91	79.57
TraesCS6A01G388200.1	Wheat	plastid	77.73	78.07
TraesCS6A01G388800.1	Wheat	plastid	75.11	74.46
TraesCS6A01G388600.1	Wheat	cytosol, plasma membrane, plastid	72.93	73.57
TraesCS6A01G388100.1	Wheat	plastid	73.36	73.36
TraesCS7A01G133600.1	Wheat	plastid	65.5	63.83
OQU76129	Sorghum	plastid	62.88	63.44
KXG19680	Sorghum	plastid	66.38	62.3
Os01t0389700-01	Rice	plastid	59.39	56.67
Zm00001d044777_P001	Maize	plastid	62.45	56.08
TraesCS6A01G388300.1	Wheat	plasma membrane	59.83	54.8
Os01t0389200-01	Rice	cytosol	58.52	50.76
TraesCS2A01G153900.1	Wheat	cytosol, peroxisome, vacuole	46.72	50.23
TraesCS6A01G123100.1	Wheat	plastid	43.23	46.05
TraesCS7A01G563500.1	Wheat	cytosol, plasma membrane, vacuole	37.55	41.75
AT5G27370.1	Thale cress	plasma membrane	31.44	37.7
TraesCS4A01G176900.1	Wheat	cytosol, peroxisome, plastid, vacuole	32.75	36.23
TraesCS7A01G324500.1	Wheat	plastid	35.37	35.68
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	29.69	35.23
TraesCS2A01G141700.1	Wheat	cytosol, peroxisome, vacuole	32.31	35.07
TraesCS1A01G395800.1	Wheat	plasma membrane	31.88	33.03
TraesCS5A01G470700.1	Wheat	cytosol, golgi, peroxisome	34.93	31.62
TraesCS3A01G407300.1	Wheat	plasma membrane	29.26	30.18
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	28.38	29.82
GSMUA_Achr5P26860_001	Banana	plasma membrane	43.23	22.4

Protein Annotations

EnsemblPlants:TraesCS2A01G055600.1	EnsemblPlantsGene:TraesCS2A01G055600	InterPro:DMP	PANTHER:PTHR31621	PFAM:PF05078	SEG:seg
TMHMM:TMhelix	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr2A:+:23878852..23879541

Molecular Weight (calculated)

25208.2 Da

IEP (calculated)

6.671

GRAVY (calculated)

0.032

Length

229 amino acids

Sequence
(BLAST)

001: MASSFSSSSM AVQIHPLTKE DDDEITAAGT APPMTTKGPA PATVMSSVAN LAQLLPTGTV LAYQALSPSF TNHGKCETSN QWLTGMLVAV LASACLFFSF
101: TDSIVGRRDG KLYYGFATPR GFNVFNFSSE EEKQEWHDLD QFRRLRLRPL DFMHAFFAAV VFLTVAFSDV GLQNCFFPDA NRNTEELLKN LPMGMAFLSS
201: FVFIIFPTKR KGIGFSDNAP PQKVVHPLN

Best Arabidopsis Sequence Match ( AT3G02430.1 )
(BLAST)

001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR

Arabidopsis Description

DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.