Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 2
- vacuole 1
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G324500.1 | Wheat | plastid | 99.12 | 99.12 |
| TraesCS7D01G320400.1 | Wheat | plastid | 98.24 | 97.38 |
| HORVU7Hr1G077620.2 | Barley | plastid | 95.15 | 88.89 |
| Os08t0106501-01 | Rice | plastid | 66.96 | 67.86 |
| Zm00001d034995_P001 | Maize | plastid | 68.28 | 65.96 |
| EES14365 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion, plastid | 71.81 | 65.2 |
| GSMUA_Achr7P23290_001 | Banana | endoplasmic reticulum | 50.66 | 52.75 |
| Solyc01g103580.2.1 | Tomato | plasma membrane | 50.66 | 51.8 |
| VIT_12s0035g00920.t01 | Wine grape | cytosol, endoplasmic reticulum, peroxisome | 53.74 | 51.05 |
| AT4G24310.1 | Thale cress | plastid | 47.58 | 50.7 |
| CDY03457 | Canola | plastid | 47.58 | 50.0 |
| CDY24837 | Canola | plasma membrane, plastid | 48.02 | 49.77 |
| PGSC0003DMT400064047 | Potato | plasma membrane | 49.78 | 49.56 |
| CDY08933 | Canola | plasma membrane | 48.02 | 49.32 |
| Bra010492.1-P | Field mustard | plastid | 47.58 | 49.32 |
| CDY34278 | Canola | plasma membrane, plastid | 47.58 | 49.09 |
| Bra013790.1-P | Field mustard | plasma membrane, plastid | 47.58 | 49.09 |
| AT3G02430.1 | Thale cress | plastid | 45.81 | 47.49 |
| CDY34728 | Canola | plasma membrane, plastid | 45.37 | 46.61 |
| Bra021460.1-P | Field mustard | plasma membrane, plastid | 45.37 | 46.61 |
| TraesCS4B01G141000.1 | Wheat | plastid | 37.0 | 40.58 |
| TraesCS1B01G424300.1 | Wheat | plasma membrane | 39.21 | 40.45 |
| TraesCS3B01G273700.1 | Wheat | cytosol, peroxisome, plasma membrane | 33.04 | 40.11 |
| TraesCS7B01G337100.1 | Wheat | plasma membrane | 33.92 | 39.9 |
| TraesCS6B01G151400.1 | Wheat | cytosol, peroxisome, plasma membrane | 35.24 | 37.04 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 25.99 | 36.88 |
| Bra021461.1-P | Field mustard | cytosol, extracellular, peroxisome | 25.99 | 36.88 |
| TraesCS2B01G068400.1 | Wheat | plastid | 36.12 | 36.77 |
| TraesCS7B01G499200.1 | Wheat | vacuole | 33.04 | 36.23 |
| TraesCS2B01G068500.1 | Wheat | plastid | 35.68 | 35.37 |
| TraesCS6B01G427600.1 | Wheat | plastid | 35.24 | 35.24 |
| TraesCS2B01G166900.1 | Wheat | cytosol, plasma membrane, vacuole | 33.04 | 35.21 |
| TraesCS6B01G427400.1 | Wheat | plastid | 35.24 | 35.09 |
| TraesCS2B01G068300.1 | Wheat | plastid | 35.24 | 34.93 |
| TraesCS2B01G179200.1 | Wheat | cytosol, peroxisome, vacuole | 34.36 | 34.36 |
| TraesCS6B01G427800.1 | Wheat | plastid | 34.8 | 34.2 |
| TraesCS6B01G427300.1 | Wheat | plastid | 33.92 | 33.62 |
| TraesCS7B01G034700.1 | Wheat | plastid | 32.16 | 32.74 |
| TraesCS6B01G427700.1 | Wheat | plastid | 34.8 | 32.51 |
| TraesCS3B01G440900.1 | Wheat | plasma membrane | 31.72 | 32.43 |
| TraesCS7B01G497700.1 | Wheat | cytosol, peroxisome, plasma membrane | 30.4 | 32.39 |
| TraesCS6B01G427500.1 | Wheat | plasma membrane | 35.24 | 31.62 |
| TraesCS7B01G024300.1 | Wheat | plastid | 32.16 | 31.33 |
| TraesCS7B01G024200.1 | Wheat | cytosol, peroxisome, plastid, vacuole | 33.92 | 31.17 |
| TraesCS7B01G399300.1 | Wheat | cytosol, peroxisome, plasma membrane | 33.04 | 30.61 |
| TraesCS7B01G499800.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 32.16 | 29.92 |
| TraesCS7B01G498800.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 29.96 | 28.81 |
| TraesCS7B01G498900.1 | Wheat | plastid | 30.4 | 28.75 |
| TraesCS6B01G469800.1 | Wheat | plastid | 30.84 | 28.34 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G225000.1 | EnsemblPlantsGene:TraesCS7B01G225000 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF10 | PFAM:PF05078 |
| SEG:seg | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chr7B:+:425410090..425410773
Molecular Weight (calculated)
23644.4 Da
IEP (calculated)
7.960
GRAVY (calculated)
0.263
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAPSASAV SVRQRTAAAA SPLLQDQQQE KHEAADPVPP PPPRSTLYQA LTSTASLANL LPTGTVLAFQ LLAPTFTNHG ACDATTALLT RILLAVLALS
101: CLLASFTDSL NGPDGRVYYG VATLRGLWLL DYPPGAPTPP DTSRYRLAPI DAVHAALSVA VFGVVAARDK NVVRCFYGPS PARETEQVLD IVPLGVGVLC
201: SLLFVAFPTR RHGIGYPVTN GAAGSST
101: CLLASFTDSL NGPDGRVYYG VATLRGLWLL DYPPGAPTPP DTSRYRLAPI DAVHAALSVA VFGVVAARDK NVVRCFYGPS PARETEQVLD IVPLGVGVLC
201: SLLFVAFPTR RHGIGYPVTN GAAGSST
001: MSSPSSLTQR NPTSSQEQSE SVPQLRRQTS QHAVMSQTLT SAANLANLLP TGTLLAFTLL IPVFTSNGSC DYPTQVLTIV LLTLLSISCF LSSFTDSVKA
101: EDGNVYYGFA TRKGMWVFDY PDPDGLGLPN LSKYRIRIID WIHAVLSVLV FGAVALRDKN AVSCFYPAPE QETKKVLDIV PMGVGVICGM LFLVFPARRH
201: GIGYPVTGDG GRR
101: EDGNVYYGFA TRKGMWVFDY PDPDGLGLPN LSKYRIRIID WIHAVLSVLV FGAVALRDKN AVSCFYPAPE QETKKVLDIV PMGVGVICGM LFLVFPARRH
201: GIGYPVTGDG GRR
Arabidopsis Description
DMP3Protein DMP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STW3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.