Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G153900.1 | Wheat | cytosol, peroxisome, vacuole | 89.43 | 95.31 |
| TraesCS2D01G159400.1 | Wheat | peroxisome | 89.43 | 95.31 |
| HORVU1Hr1G067430.1 | Barley | mitochondrion | 87.67 | 87.67 |
| HORVU2Hr1G027720.1 | Barley | mitochondrion, plastid | 75.33 | 75.33 |
| TraesCS6B01G151400.1 | Wheat | cytosol, peroxisome, plasma membrane | 67.4 | 70.83 |
| Os01t0388700-01 | Rice | cytosol, peroxisome, plasma membrane | 69.16 | 69.78 |
| KXG32269 | Sorghum | cytosol, peroxisome, plasma membrane | 68.28 | 67.1 |
| Zm00001d008235_P001 | Maize | golgi, peroxisome, plasma membrane | 66.52 | 66.52 |
| GSMUA_AchrUn_... | Banana | plastid | 47.58 | 54.82 |
| TraesCS2B01G068400.1 | Wheat | plastid | 44.93 | 45.74 |
| TraesCS6B01G427600.1 | Wheat | plastid | 45.37 | 45.37 |
| TraesCS2B01G068500.1 | Wheat | plastid | 45.37 | 44.98 |
| TraesCS6B01G427300.1 | Wheat | plastid | 45.37 | 44.98 |
| TraesCS7B01G034700.1 | Wheat | plastid | 44.05 | 44.84 |
| TraesCS6B01G427400.1 | Wheat | plastid | 44.93 | 44.74 |
| TraesCS7B01G024300.1 | Wheat | plastid | 45.37 | 44.21 |
| TraesCS2B01G068300.1 | Wheat | plastid | 44.49 | 44.1 |
| TraesCS7B01G024200.1 | Wheat | cytosol, peroxisome, plastid, vacuole | 47.58 | 43.72 |
| TraesCS6B01G427800.1 | Wheat | plastid | 44.49 | 43.72 |
| TraesCS6B01G427700.1 | Wheat | plastid | 46.7 | 43.62 |
| TraesCS7B01G399300.1 | Wheat | cytosol, peroxisome, plasma membrane | 46.26 | 42.86 |
| TraesCS7B01G499200.1 | Wheat | vacuole | 37.44 | 41.06 |
| TraesCS7B01G337100.1 | Wheat | plasma membrane | 33.48 | 39.38 |
| TraesCS4B01G141000.1 | Wheat | plastid | 35.24 | 38.65 |
| TraesCS7B01G497700.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.12 | 38.5 |
| TraesCS6B01G427500.1 | Wheat | plasma membrane | 40.97 | 36.76 |
| TraesCS7B01G498900.1 | Wheat | plastid | 38.33 | 36.25 |
| TraesCS7B01G499800.1 | Wheat | endoplasmic reticulum, peroxisome, vacuole | 38.33 | 35.66 |
| TraesCS6B01G469800.1 | Wheat | plastid | 38.77 | 35.63 |
| AT5G27370.1 | Thale cress | plasma membrane | 29.96 | 35.6 |
| TraesCS7B01G498800.1 | Wheat | cytosol, plasma membrane, plastid, vacuole | 36.56 | 35.17 |
| TraesCS7B01G225000.1 | Wheat | plastid | 34.36 | 34.36 |
| TraesCS2B01G166900.1 | Wheat | cytosol, plasma membrane, vacuole | 32.16 | 34.27 |
| TraesCS1B01G424300.1 | Wheat | plasma membrane | 32.6 | 33.64 |
| TraesCS3B01G273700.1 | Wheat | cytosol, peroxisome, plasma membrane | 27.31 | 33.16 |
| TraesCS3B01G440900.1 | Wheat | plasma membrane | 27.31 | 27.93 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G179200.1 | EnsemblPlantsGene:TraesCS2B01G179200 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF2 | PFAM:PF05078 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr2B:+:153903469..153904152
Molecular Weight (calculated)
23791.5 Da
IEP (calculated)
5.974
GRAVY (calculated)
0.338
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MDSGVSSNQP AGGSMDSGAI SVQMPVTGQE CPPQEAKPVK GKSPVDKTLS GASDLLKLLP TGTVMAFQAL APSFTNHGVC HTANGYLVLA LIGACALSCV
101: LLSFTDSLVG SDGKLYYGIA TFRSFYPFNF AGAAAERDAM FNDLGRFRLT GLDFVHAVFS AVVFLAVAFS DASIQSCLFP DAGADVRELL VNLPLGAGFL
201: SSVVFMIFPT TRKSVGYTDM TPHSHSQ
101: LLSFTDSLVG SDGKLYYGIA TFRSFYPFNF AGAAAERDAM FNDLGRFRLT GLDFVHAVFS AVVFLAVAFS DASIQSCLFP DAGADVRELL VNLPLGAGFL
201: SSVVFMIFPT TRKSVGYTDM TPHSHSQ
001: MEKTEESVGI RVYTATPPQK PSPSPPSRSP KPVLISSLPS LPSGAAAGGG RGRKRRMVAQ GVQKTVSKTS MLVNFLPTGT LLMFEMVLPS IYRDGDCNGI
101: NTLMIHLLLL LCAMSCFFFH FTDSFKASDG KIYYGFVTPR GLAVFMKPPP PEFGGGDVIA EAEIPVTDDR YKLTVNDFVH AVMSVLVFMA IAFSDRRVTG
201: CLFPGKEKEM DQVMESFPIM VGIVCSALFL VFPTTRYGVG CMTG
101: NTLMIHLLLL LCAMSCFFFH FTDSFKASDG KIYYGFVTPR GLAVFMKPPP PEFGGGDVIA EAEIPVTDDR YKLTVNDFVH AVMSVLVFMA IAFSDRRVTG
201: CLFPGKEKEM DQVMESFPIM VGIVCSALFL VFPTTRYGVG CMTG
Arabidopsis Description
DMP9Protein DMP9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK96]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.