Factsheet for Os08t0106501-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0200500-01
Os02t0643000-01
Os04t0471300-01
Os04t0534400-01
Os05t0520100-00
Os08t0156700-01
Os08t0497900-01
Os09t0481300-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G24310.1	Os01t0200500-01	AT3G16310.1	21798944
AT4G24310.1	Os05t0520100-00	AT3G16310.1	21798944
AT4G24310.1	Os02t0643000-01	AT3G60600.1	21798944
AT4G24310.1	Os04t0534400-01	AT3G60600.1	21798944
AT4G24310.1	Os08t0156700-01	AT3G60600.1	21798944
AT4G24310.1	Os04t0471300-01	AT4G26455.1	21798944
AT4G24310.1	Os08t0497900-01	AT4G26455.1	21798944
AT4G24310.1	Os09t0481300-01	AT4G26455.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G225000.1	Wheat	plastid	67.86	66.96
TraesCS7A01G324500.1	Wheat	plastid	67.86	66.96
TraesCS7D01G320400.1	Wheat	plastid	68.3	66.81
HORVU7Hr1G077620.2	Barley	plastid	67.86	62.55
Zm00001d034995_P001	Maize	plastid	59.82	57.02
GSMUA_Achr7P23290_001	Banana	endoplasmic reticulum	55.36	56.88
EES14365	Sorghum	cytosol, endoplasmic reticulum, mitochondrion, plastid	62.05	55.6
VIT_12s0035g00920.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	58.48	54.81
Solyc01g103580.2.1	Tomato	plasma membrane	52.68	53.15
CDY03457	Canola	plastid	50.45	52.31
AT4G24310.1	Thale cress	plastid	49.11	51.64
CDY34278	Canola	plasma membrane, plastid	50.45	51.36
Bra013790.1-P	Field mustard	plasma membrane, plastid	50.45	51.36
CDY24837	Canola	plasma membrane, plastid	49.55	50.68
PGSC0003DMT400064047	Potato	plasma membrane	51.34	50.44
AT3G02430.1	Thale cress	plastid	49.11	50.23
Bra010492.1-P	Field mustard	plastid	49.11	50.23
CDY08933	Canola	plasma membrane	49.55	50.23
CDY34728	Canola	plasma membrane, plastid	49.11	49.77
Bra021460.1-P	Field mustard	plasma membrane, plastid	49.11	49.77
Os03t0370400-01	Rice	plastid	36.61	42.49
CDY34726	Canola	cytosol, extracellular, peroxisome	29.91	41.88
Bra021461.1-P	Field mustard	cytosol, extracellular, peroxisome	29.91	41.88
Os05t0562800-02	Rice	plastid	42.41	39.92
Os07t0645300-01	Rice	plasma membrane, vacuole	32.59	38.83
Os01t0388700-01	Rice	cytosol, peroxisome, plasma membrane	37.95	37.78
Os01t0368700-01	Rice	cytosol, plasma membrane	36.16	36.0
Os06t0352200-01	Rice	plasma membrane, plastid	38.84	34.39
Os01t0389700-01	Rice	plastid	36.16	33.75
Os07t0407900-01	Rice	cytosol, peroxisome, plasma membrane	38.39	32.82
Os01t0882400-01	Rice	cytosol, peroxisome	33.48	31.38
Os01t0389200-01	Rice	cytosol	34.38	29.17
Os01t0368500-00	Rice	golgi, nucleus, plasma membrane	35.71	25.16

Protein Annotations

MapMan:35.1	EntrezGene:9272541	EMBL:AK243671	ProteinID:BAD08943.1	ProteinID:BAD09382.1	ProteinID:BAH94082.1
ProteinID:BAT03455.1	InterPro:DMP	ProteinID:EAZ41248.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0008150	GO:GO:0009705	GO:GO:0009987
GO:GO:0010256	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	EnsemblPlantsGene:Os08g0106501	EnsemblPlants:Os08t0106501-01
PFAM:PF05078	PANTHER:PTHR31621	PANTHER:PTHR31621:SF10	UniProt:Q6ZD78	TMHMM:TMhelix	UniParc:UPI000023AC7D
RefSeq:XP_015648988.1	SEG:seg	:	:	:	:

Description

Protein of unknown function DUF679 family protein. (Os08t0106501-01)

Coordinates

chr8:-:321888..322992

Molecular Weight (calculated)

22822.5 Da

IEP (calculated)

8.946

GRAVY (calculated)

0.273

Length

224 amino acids

Sequence
(BLAST)

001: MASPAVVRQR PTVGKQAGEG ESAAAAGDGG GGRPPAARRP SLLSQALAST ASLANLLPTG TVMAFQLLAP TFTNNGACDA TTSLLTAALL ALLALSCVLA
101: SFTDSVRGPD GRVYYGLATP RGLWLLDYPP AGAGAPPQPD TSRYRMRAID GVHALLSVGV FGVVAARDKN VVGCFWPSPA KGTEEVLGIV PLGVGVMCSL
201: LFVVFPTTRH GIGYPVTNNT TSSS

Best Arabidopsis Sequence Match ( AT4G24310.1 )
(BLAST)

001: MSSPSSLTQR NPTSSQEQSE SVPQLRRQTS QHAVMSQTLT SAANLANLLP TGTLLAFTLL IPVFTSNGSC DYPTQVLTIV LLTLLSISCF LSSFTDSVKA
101: EDGNVYYGFA TRKGMWVFDY PDPDGLGLPN LSKYRIRIID WIHAVLSVLV FGAVALRDKN AVSCFYPAPE QETKKVLDIV PMGVGVICGM LFLVFPARRH
201: GIGYPVTGDG GRR

Arabidopsis Description

DMP3Protein DMP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STW3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.