Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 1
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY03457 | Canola | plastid | 90.14 | 88.89 |
| CDY34278 | Canola | plasma membrane, plastid | 90.14 | 87.27 |
| Bra013790.1-P | Field mustard | plasma membrane, plastid | 90.14 | 87.27 |
| CDY08933 | Canola | plasma membrane | 87.32 | 84.16 |
| CDY24837 | Canola | plasma membrane, plastid | 85.45 | 83.11 |
| Bra010492.1-P | Field mustard | plastid | 85.45 | 83.11 |
| AT3G02430.1 | Thale cress | plastid | 69.48 | 67.58 |
| Solyc01g103580.2.1 | Tomato | plasma membrane | 58.69 | 56.31 |
| GSMUA_Achr7P23290_001 | Banana | endoplasmic reticulum | 55.87 | 54.59 |
| VIT_12s0035g00920.t01 | Wine grape | cytosol, endoplasmic reticulum, peroxisome | 58.69 | 52.3 |
| PGSC0003DMT400064047 | Potato | plasma membrane | 55.87 | 52.19 |
| Os08t0106501-01 | Rice | plastid | 51.64 | 49.11 |
| TraesCS7D01G320400.1 | Wheat | plastid | 51.64 | 48.03 |
| TraesCS7A01G324500.1 | Wheat | plastid | 51.17 | 48.02 |
| TraesCS7B01G225000.1 | Wheat | plastid | 50.7 | 47.58 |
| HORVU7Hr1G077620.2 | Barley | plastid | 52.11 | 45.68 |
| Zm00001d034995_P001 | Maize | plastid | 47.89 | 43.4 |
| EES14365 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion, plastid | 48.83 | 41.6 |
| AT4G28485.2 | Thale cress | plasma membrane, plastid | 38.03 | 40.5 |
| AT5G46090.1 | Thale cress | plasma membrane | 39.91 | 39.72 |
| AT3G21550.1 | Thale cress | plasma membrane | 34.27 | 39.67 |
| AT4G18425.1 | Thale cress | endoplasmic reticulum, peroxisome, plasma membrane | 39.44 | 39.44 |
| AT5G27370.1 | Thale cress | plasma membrane | 32.39 | 36.13 |
| AT3G21520.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 33.8 | 34.78 |
| AT5G39650.1 | Thale cress | plastid | 34.27 | 29.92 |
| AT1G09157.1 | Thale cress | plastid | 32.86 | 28.81 |
Protein Annotations
| MapMan:35.1 | EntrezGene:828534 | ProteinID:AEE84888.1 | EMBL:AK228084 | ArrayExpress:AT4G24310 | EnsemblPlantsGene:AT4G24310 |
| RefSeq:AT4G24310 | TAIR:AT4G24310 | RefSeq:AT4G24310-TAIR-G | EnsemblPlants:AT4G24310.1 | TAIR:AT4G24310.1 | EMBL:BT004778 |
| ProteinID:CAB45066.1 | ProteinID:CAB79341.1 | InterPro:DMP | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005783 | GO:GO:0005789 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0009705 | GO:GO:0009987 | GO:GO:0010256 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 |
| GO:GO:0090693 | RefSeq:NP_194162.1 | PFAM:PF05078 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000293 |
| PO:PO:0009001 | PO:PO:0009005 | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF10 | UniProt:Q9STW3 | TMHMM:TMhelix |
| UniParc:UPI000000C480 | SEG:seg | : | : | : | : |
Description
DMP3Protein DMP3 [Source:UniProtKB/Swiss-Prot;Acc:Q9STW3]
Coordinates
chr4:+:12600803..12601726
Molecular Weight (calculated)
23208.1 Da
IEP (calculated)
8.312
GRAVY (calculated)
0.150
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPSSLTQR NPTSSQEQSE SVPQLRRQTS QHAVMSQTLT SAANLANLLP TGTLLAFTLL IPVFTSNGSC DYPTQVLTIV LLTLLSISCF LSSFTDSVKA
101: EDGNVYYGFA TRKGMWVFDY PDPDGLGLPN LSKYRIRIID WIHAVLSVLV FGAVALRDKN AVSCFYPAPE QETKKVLDIV PMGVGVICGM LFLVFPARRH
201: GIGYPVTGDG GRR
101: EDGNVYYGFA TRKGMWVFDY PDPDGLGLPN LSKYRIRIID WIHAVLSVLV FGAVALRDKN AVSCFYPAPE QETKKVLDIV PMGVGVICGM LFLVFPARRH
201: GIGYPVTGDG GRR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.