Factsheet for Bra021461.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, cytosol

Predictor Summary:

nucleus 1
extracellular 2
plasma membrane 2
plastid 1
endoplasmic reticulum 1
vacuole 1
golgi 1
cytosol 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, peroxisome
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34726	Canola	cytosol, extracellular, peroxisome	100.0	100.0
AT3G02430.1	Thale cress	plastid	79.38	57.99
Bra021460.1-P	Field mustard	plasma membrane, plastid	77.5	56.11
Bra010492.1-P	Field mustard	plastid	61.88	45.21
Bra013790.1-P	Field mustard	plasma membrane, plastid	61.25	44.55
GSMUA_Achr7P23290_001	Banana	endoplasmic reticulum	48.12	35.32
Solyc01g103580.2.1	Tomato	plasma membrane	46.88	33.78
VIT_12s0035g00920.t01	Wine grape	cytosol, endoplasmic reticulum, peroxisome	49.38	33.05
PGSC0003DMT400064047	Potato	plasma membrane	46.25	32.46
Os08t0106501-01	Rice	plastid	41.88	29.91
TraesCS7D01G320400.1	Wheat	plastid	38.75	27.07
TraesCS7A01G324500.1	Wheat	plastid	37.5	26.43
Zm00001d034995_P001	Maize	plastid	38.75	26.38
TraesCS7B01G225000.1	Wheat	plastid	36.88	25.99
HORVU7Hr1G077620.2	Barley	plastid	38.12	25.1
EES14365	Sorghum	cytosol, endoplasmic reticulum, mitochondrion, plastid	38.12	24.4
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.5	24.3
Bra013307.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.5	23.21
Bra031289.1-P	Field mustard	plasma membrane	26.25	22.7
Bra023875.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	28.12	22.28
Bra031287.1-P	Field mustard	plasma membrane	28.12	22.06
Bra024198.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane, plastid	27.5	22.0
Bra011032.1-P	Field mustard	plasma membrane	27.5	22.0
Bra025039.1-P	Field mustard	plasma membrane	29.38	21.66
Bra023874.1-P	Field mustard	plasma membrane	25.0	21.62
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.25	20.75
Bra006030.1-P	Field mustard	plasma membrane	23.75	20.11
Bra025657.1-P	Field mustard	plastid	28.75	18.85

Protein Annotations

EnsemblPlants:Bra021461.1	EnsemblPlants:Bra021461.1-P	EnsemblPlantsGene:Bra021461	InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF10
PFAM:PF05078	SEG:seg	TMHMM:TMhelix	UniParc:UPI0002544911	UniProt:M4DY65	MapMan:35.1

Description

AT3G02430 (E=7e-058) | unknown protein

Coordinates

chrA01:+:25127877..25129340

Molecular Weight (calculated)

17628.4 Da

IEP (calculated)

6.781

GRAVY (calculated)

0.069

Length

160 amino acids

Sequence
(BLAST)

001: MSGLKLRNAN VPVPELDDLS EQLPSETRPE MLTRQTSMSQ RAMPSTLTSA ANLSNLLPTG TLLAFQLLTP VFTSNGVCDH ATRLLTAALL FLLAGPVYGI
101: SGVKAEDGTI YYGFVTHKGM WVVDYPDPSG LGLPDLSKYR MRFVDWIHAT LSVWCLERLR

Best Arabidopsis Sequence Match ( AT3G02430.1 )
(BLAST)

001: MSALRLRNAN TPAPELDELS DQTPSESRVL KRQMSMSQRA MSNTLTSAAN LSNLLPTGTL LAFQLLTPVF TSNGVCDHAT RFLTAVLLFL LAASCFVSSF
101: TDSVKADDGT IYFGFVTFKG MWVVDYPDPS GLGLPDLAKY RMRFVDWIHA TLSVLVFGAV ALRDKYITDC FYPSPEAETK HVLDIVPVGV GVMCSLLFMV
201: FPARRHGIGY LVTGSVDRR

Arabidopsis Description

DMP5Protein DMP5 [Source:UniProtKB/Swiss-Prot;Acc:Q9M897]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.