Factsheet for Bra013307.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
nucleus 1
plasma membrane 3
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, nucleus, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, plastid
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78854	Canola	cytosol, peroxisome, plasma membrane	99.55	99.55
Bra021010.1-P	Field mustard	cytosol, peroxisome, plasma membrane	85.27	89.25
AT4G18425.1	Thale cress	endoplasmic reticulum, peroxisome, plasma membrane	83.04	87.32
Bra025039.1-P	Field mustard	plasma membrane	63.39	65.44
PGSC0003DMT400081227	Potato	plasma membrane	59.82	64.11
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	67.86	63.07
VIT_13s0106g00720.t01	Wine grape	plasma membrane	58.93	62.56
Solyc02g077640.1.1	Tomato	plasma membrane	58.04	62.2
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	56.7	60.19
GSMUA_Achr4P10580_001	Banana	cytosol	53.12	57.21
KRH20387	Soybean	plasma membrane	53.57	55.3
GSMUA_Achr4P02720_001	Banana	plasma membrane	51.79	54.98
VIT_10s0003g00320.t01	Wine grape	plasma membrane	58.93	53.88
KRH50120	Soybean	peroxisome	45.54	49.04
KXG33079	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	44.2	47.6
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	39.73	47.59
Bra024198.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane, plastid	41.07	46.0
Bra011032.1-P	Field mustard	plasma membrane	41.07	46.0
TraesCS3D01G245600.1	Wheat	cytosol, peroxisome, plasma membrane	43.75	45.79
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	42.41	45.67
HORVU1Hr1G087380.1	Barley	mitochondrion	49.11	44.9
Os05t0562800-02	Rice	plastid	47.32	44.54
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	43.3	44.5
Bra010492.1-P	Field mustard	plastid	42.41	43.38
Bra021460.1-P	Field mustard	plasma membrane, plastid	41.07	41.63
Bra013790.1-P	Field mustard	plasma membrane, plastid	40.18	40.91
Bra031289.1-P	Field mustard	plasma membrane	32.59	39.46
Os06t0352200-01	Rice	plasma membrane, plastid	43.75	38.74
Bra023874.1-P	Field mustard	plasma membrane	31.25	37.84
Bra023875.1-P	Field mustard	endoplasmic reticulum, plasma membrane, plastid, vacuole	32.14	35.64
Bra006030.1-P	Field mustard	plasma membrane	28.57	33.86
Bra031287.1-P	Field mustard	plasma membrane	30.8	33.82
Bra021461.1-P	Field mustard	cytosol, extracellular, peroxisome	23.21	32.5
Bra025657.1-P	Field mustard	plastid	33.48	30.74

Protein Annotations

EnsemblPlants:Bra013307.1	EnsemblPlants:Bra013307.1-P	EnsemblPlantsGene:Bra013307	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF0	PFAM:PF05078	TMHMM:TMhelix	UniParc:UPI000254608B
UniProt:M4D9Z7	MapMan:35.1	:	:	:	:

Description

AT4G18425 (E=3e-106) | unknown protein

Coordinates

chrA01:-:4888481..4889155

Molecular Weight (calculated)

24597.7 Da

IEP (calculated)

5.644

GRAVY (calculated)

0.176

Length

224 amino acids

Sequence
(BLAST)

001: MNKGKSFKDM EINVVDRDHQ GNAQEEIEKP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDVVS KIMTSVLVAV
101: CGFSCFILSF TDSYKDKNGT ICYGFATIHG FWIIDGSATL PQELSKKYKL RFIDFAHAFM SLLVFGAVGL FDRNTVNCFF PAPSAEALEV LTALPVGVGV
201: FCSMLFATFP TTRNGIGFPV PGNK

Best Arabidopsis Sequence Match ( AT4G18425.1 )
(BLAST)

001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK

Arabidopsis Description

DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.