Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- extracellular 2
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023874.1-P | Field mustard | plasma membrane | 97.84 | 97.84 |
| CDY37280 | Canola | plasma membrane | 97.3 | 97.3 |
| CDY38623 | Canola | plasma membrane | 92.43 | 92.43 |
| CDY44328 | Canola | plasma membrane | 91.89 | 91.89 |
| AT3G21550.1 | Thale cress | plasma membrane | 87.57 | 88.04 |
| PGSC0003DMT400081771 | Potato | extracellular | 59.46 | 63.22 |
| Solyc01g080490.2.1 | Tomato | extracellular | 58.38 | 62.07 |
| VIT_05s0020g02280.t01 | Wine grape | plastid | 64.32 | 61.98 |
| GSMUA_Achr11P... | Banana | plasma membrane | 58.38 | 54.82 |
| KRH20960 | Soybean | plastid | 53.51 | 48.53 |
| Zm00001d047420_P001 | Maize | plasma membrane | 48.11 | 47.34 |
| EER94799 | Sorghum | plasma membrane | 48.65 | 46.63 |
| Os03t0370400-01 | Rice | plastid | 48.11 | 46.11 |
| KRH50953 | Soybean | plastid | 53.51 | 45.0 |
| TraesCS7B01G337100.1 | Wheat | plasma membrane | 46.49 | 44.56 |
| TraesCS7A01G438100.1 | Wheat | endoplasmic reticulum, mitochondrion, plasma membrane, vacuole | 46.49 | 44.56 |
| KRH02164 | Soybean | endoplasmic reticulum | 50.27 | 44.5 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 48.11 | 44.06 |
| HORVU7Hr1G100090.1 | Barley | plasma membrane | 45.41 | 43.52 |
| CDY37281 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 47.03 | 43.07 |
| KRH50952 | Soybean | plasma membrane, plastid | 50.81 | 42.34 |
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 37.84 | 41.92 |
| CDY38622 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 45.95 | 41.67 |
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 9.19 | 37.78 |
| CDY38387 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 37.3 | 34.5 |
| CDY03457 | Canola | plastid | 40.0 | 34.26 |
| CDY29909 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 36.76 | 34.0 |
| CDY35189 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 36.76 | 34.0 |
| CDX92877 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 36.76 | 34.0 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 38.92 | 33.64 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 38.92 | 33.64 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 38.92 | 33.64 |
| CDY33452 | Canola | plasma membrane | 39.46 | 33.64 |
| CDY34278 | Canola | plasma membrane, plastid | 40.0 | 33.64 |
| CDX77630 | Canola | plasma membrane | 38.92 | 33.18 |
| CDY34571 | Canola | plasma membrane | 38.38 | 32.72 |
| CDY08933 | Canola | plasma membrane | 38.38 | 32.13 |
| CDY24837 | Canola | plasma membrane, plastid | 37.84 | 31.96 |
| CDY60883 | Canola | cytosol | 37.84 | 31.25 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 37.84 | 31.25 |
| CDY34728 | Canola | plasma membrane, plastid | 35.68 | 29.86 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 35.14 | 26.97 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 35.14 | 26.97 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 21.08 | 24.38 |
| CDX74441 | Canola | plastid | 30.27 | 22.95 |
| CDX81135 | Canola | plastid | 29.19 | 22.31 |
| CDY56548 | Canola | plastid | 28.65 | 21.9 |
| CDY38243 | Canola | cytosol | 15.68 | 21.32 |
| CDY30259 | Canola | plastid | 13.51 | 18.8 |
Protein Annotations
| EnsemblPlants:CDY19288 | EnsemblPlantsGene:GSBRNA2T00006625001 | GO:A0A078G3J4 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF1 | PFAM:PF05078 | ProteinID:CDY19288 | ProteinID:CDY19288.1 |
| TMHMM:TMhelix | UniParc:UPI0004EC3146 | UniProt:A0A078G3J4 | MapMan:35.1 | : | : |
Description
BnaC01g31920DBnaC01g31920D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G3J4]
Coordinates
chrLK032094:-:225302..225859
Molecular Weight (calculated)
20383.7 Da
IEP (calculated)
8.582
GRAVY (calculated)
0.311
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTTFKSIRD RTYSGVGDLI RLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGALIVICA FSCCFTCFTD SYRTRDGYVH YGVATMKGLW PDSSSKDLSS
101: YRLRVGDFVP AFFTLIVFSV ISLLDANTVN CFYPGFGSTG KIFLMVLPPV VGVISGIIFT VFPSKRHGIG NPSENNDDNA SKLEK
101: YRLRVGDFVP AFFTLIVFSV ISLLDANTVN CFYPGFGSTG KIFLMVLPPV VGVISGIIFT VFPSKRHGIG NPSENNDDNA SKLEK
001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK
Arabidopsis Description
DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.