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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • mitochondrion 2
  • extracellular 2
  • golgi 2
  • nucleus 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d047420_P001 Maize plasma membrane 88.08 90.43
Os03t0370400-01 Rice plastid 86.53 86.53
TraesCS7D01G428000.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plasma membrane 73.06 84.43
HORVU7Hr1G100090.1 Barley plasma membrane 83.94 83.94
TraesCS7A01G438100.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 82.9 82.9
TraesCS7B01G337100.1 Wheat plasma membrane 82.38 82.38
GSMUA_Achr6P08370_001 Banana cytosol, endoplasmic reticulum, plasma membrane 56.99 56.7
VIT_05s0020g02280.t01 Wine grape plastid 51.3 51.56
PGSC0003DMT400081771 Potato extracellular 45.08 50.0
Solyc01g080490.2.1 Tomato extracellular 44.56 49.43
AT3G21550.1 Thale cress plasma membrane 46.63 48.91
Bra023874.1-P Field mustard plasma membrane 46.63 48.65
Bra031289.1-P Field mustard plasma membrane 46.63 48.65
CDY19288 Canola extracellular, plasma membrane, vacuole 46.63 48.65
CDY37280 Canola plasma membrane 46.63 48.65
CDY38623 Canola plasma membrane 46.63 48.65
CDY44328 Canola plasma membrane 46.63 48.65
KRH20960 Soybean plastid 49.74 47.06
EER97642 Sorghum peroxisome 50.78 44.34
KRH50953 Soybean plastid 49.74 43.64
KRH02164 Soybean endoplasmic reticulum 46.63 43.06
KRH50952 Soybean plasma membrane, plastid 48.19 41.89
EER89477 Sorghum plastid 35.75 32.55
KXG32269 Sorghum cytosol, peroxisome, plasma membrane 38.86 32.47
KXG19859 Sorghum plasma membrane 37.82 32.16
KXG33079 Sorghum cytosol, endoplasmic reticulum, plasma membrane 34.2 31.73
KXG32858 Sorghum plastid 25.39 31.61
EES19945 Sorghum cytosol 38.86 31.38
OQU76129 Sorghum plastid 36.79 31.28
EES05060 Sorghum cytosol, plasma membrane, vacuole 33.68 31.25
EES01865 Sorghum plasma membrane 35.75 31.08
KXG19680 Sorghum plastid 37.82 29.92
EES14365 Sorghum cytosol, endoplasmic reticulum, mitochondrion, plastid 37.82 29.2
KXG32859 Sorghum plastid 31.61 26.87
EER88463 Sorghum plastid 32.64 22.66
Protein Annotations
MapMan:35.1EntrezGene:8082599UniProt:C5WYP8InterPro:DMPEnsemblPlants:EER94799ProteinID:EER94799
ProteinID:EER94799.1GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773
GO:GO:0005783GO:GO:0008150GO:GO:0009705GO:GO:0009987GO:GO:0010256GO:GO:0016020
GO:GO:0016021GO:GO:0016043PFAM:PF05078PANTHER:PTHR31621PANTHER:PTHR31621:SF26EnsemblPlantsGene:SORBI_3001G359700
TMHMM:TMhelixUniParc:UPI0001A8336CRefSeq:XP_002467801.1SEG:seg::
Description
hypothetical protein
Coordinates
chr1:-:64944686..64945267
Molecular Weight (calculated)
20506.9 Da
IEP (calculated)
7.956
GRAVY (calculated)
0.453
Length
193 amino acids
Sequence
(BLAST)
001: MAAPRSVSVR VADRALRGVA DLIKLLPSGT VFMFQFLSPL VTNNGHCALA LNKVLSGALV ALCGASCAFS SFTDSYVGAD GRVYYGVVTP RGLRTFATDP
101: DAAARDLSPY RLRAGDFVHA ALALLVFAAI ALLDADTVAC LYPALELSER TMMAVLPPVV GAVAGYVFMV FPNNRHGVGY QPTTATEDFQ HKY
Best Arabidopsis Sequence Match ( AT3G21550.1 )
(BLAST)
001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK
Arabidopsis Description
DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.