Factsheet for Solyc01g080490.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 1
mitochondrion 2
extracellular 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400081771	Potato	extracellular	96.55	96.55
VIT_05s0020g02280.t01	Wine grape	plastid	65.52	59.38
Bra023874.1-P	Field mustard	plasma membrane	62.07	58.38
CDY19288	Canola	extracellular, plasma membrane, vacuole	62.07	58.38
CDY37280	Canola	plasma membrane	62.07	58.38
CDY38623	Canola	plasma membrane	60.92	57.3
Bra031289.1-P	Field mustard	plasma membrane	60.34	56.76
CDY44328	Canola	plasma membrane	60.34	56.76
AT3G21550.1	Thale cress	plasma membrane	59.77	56.52
GSMUA_Achr11P...	Banana	plasma membrane	61.49	54.31
KRH20960	Soybean	plastid	55.75	47.55
Zm00001d047420_P001	Maize	plasma membrane	49.43	45.74
EER94799	Sorghum	plasma membrane	49.43	44.56
TraesCS7A01G438100.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	47.7	43.01
HORVU7Hr1G100090.1	Barley	plasma membrane	47.7	43.01
KRH02164	Soybean	endoplasmic reticulum	51.15	42.58
TraesCS7D01G428000.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	40.8	42.52
Os03t0370400-01	Rice	plastid	47.13	42.49
TraesCS7B01G337100.1	Wheat	plasma membrane	47.13	42.49
KRH50952	Soybean	plasma membrane, plastid	52.3	40.99
KRH50953	Soybean	plastid	50.0	39.55
Solyc02g077640.1.1	Tomato	plasma membrane	39.66	33.01
Solyc10g008970.1.1	Tomato	plasma membrane	41.38	32.88
Solyc01g103580.2.1	Tomato	plasma membrane	40.8	31.98
Solyc12g005490.1.1	Tomato	plasma membrane	36.78	28.44
Solyc05g007920.2.1	Tomato	cytosol	33.91	26.22
Solyc10g050200.1.1	Tomato	plasma membrane	31.03	25.59

Protein Annotations

MapMan:35.1	InterPro:DMP	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005773	GO:GO:0005783	GO:GO:0007275	GO:GO:0008150	GO:GO:0009705	GO:GO:0009838
GO:GO:0009987	GO:GO:0010256	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	UniProt:K4AXU3
PFAM:PF05078	PANTHER:PTHR31621	PANTHER:PTHR31621:SF1	EnsemblPlantsGene:Solyc01g080490.2	EnsemblPlants:Solyc01g080490.2.1	TMHMM:TMhelix
UniParc:UPI000276234D	:	:	:	:	:

Description

No Description!

Coordinates

chr1:-:79721811..79722647

Molecular Weight (calculated)

19011.2 Da

IEP (calculated)

7.873

GRAVY (calculated)

0.337

Length

174 amino acids

Sequence
(BLAST)

001: MAKPNYTLKD KTLNGLGNLI RLLPTGTVFI YQLLNPILTN DGHCTIINKY LSGILIALCG LSCGFSCFTD SYTDNEGSTH YGIATMKGLW PTSKSMDTSS
101: YKIGVGDFVH AFFTMVVFGV VTILDRNTVD CFFPAFESTE KTLIMVLPPV VGAISSVVFM VFPNKRHGIG YPSN

Best Arabidopsis Sequence Match ( AT3G21550.1 )
(BLAST)

001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK

Arabidopsis Description

DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.