Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400015923 | Potato | plasma membrane | 98.58 | 98.58 |
| VIT_18s0086g00700.t01 | Wine grape | plasma membrane | 66.35 | 65.73 |
| KRH70214 | Soybean | peroxisome | 62.56 | 60.55 |
| KRH08569 | Soybean | peroxisome | 61.14 | 58.9 |
| GSMUA_Achr8P32620_001 | Banana | plasma membrane | 59.24 | 57.87 |
| TraesCS3D01G402600.1 | Wheat | plasma membrane | 58.29 | 55.41 |
| TraesCS3A01G407300.1 | Wheat | plasma membrane | 58.29 | 55.41 |
| TraesCS3B01G440900.1 | Wheat | plasma membrane | 57.82 | 54.95 |
| EES01865 | Sorghum | plasma membrane | 57.35 | 54.5 |
| Os01t0882400-01 | Rice | cytosol, peroxisome | 58.29 | 51.46 |
| Zm00001d012217_P001 | Maize | plasma membrane | 57.82 | 47.66 |
| Solyc01g103580.2.1 | Tomato | plasma membrane | 33.18 | 31.53 |
| Solyc02g077640.1.1 | Tomato | plasma membrane | 30.81 | 31.1 |
| Solyc01g080490.2.1 | Tomato | extracellular | 25.59 | 31.03 |
| Solyc12g005490.1.1 | Tomato | plasma membrane | 32.23 | 30.22 |
| Solyc10g008970.1.1 | Tomato | plasma membrane | 29.38 | 28.31 |
| Solyc05g007920.2.1 | Tomato | cytosol | 26.54 | 24.89 |
Protein Annotations
| EnsemblPlants:Solyc10g050200.1.1 | EnsemblPlantsGene:Solyc10g050200.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0009987 | GO:GO:0010256 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF4 |
| PFAM:PF05078 | TMHMM:TMhelix | UniParc:UPI000276A3A6 | UniProt:K4D0H6 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr10:+:48118856..48119491
Molecular Weight (calculated)
24066.9 Da
IEP (calculated)
5.607
GRAVY (calculated)
0.234
Length
211 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNNFLYQHL SESDEPDESD FYLPDYDNQE EDDSNFIYII NTILSGTARL NVLLPTATIL AFTIFAPILT NDGQCNKFEQ WMTGIFLILS AASCVFFSFT
101: DSFKSATGRL HYGVATFSGI WTFNGRRIKP CVPRDYRLRW SDIFHASLSL IALLTFAASH TDVLQCYRFV VPRKIINTVP LVIGFVISLL FVIFPSRRRG
201: IGYPFLLQSD I
101: DSFKSATGRL HYGVATFSGI WTFNGRRIKP CVPRDYRLRW SDIFHASLSL IALLTFAASH TDVLQCYRFV VPRKIINTVP LVIGFVISLL FVIFPSRRRG
201: IGYPFLLQSD I
001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
Arabidopsis Description
DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.