Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400015923 | Potato | plasma membrane | 66.2 | 66.82 |
| Solyc10g050200.1.1 | Tomato | plasma membrane | 65.73 | 66.35 |
| KRH70214 | Soybean | peroxisome | 67.14 | 65.6 |
| KRH08569 | Soybean | peroxisome | 66.2 | 64.38 |
| GSMUA_Achr8P32620_001 | Banana | plasma membrane | 63.85 | 62.96 |
| TraesCS3D01G402600.1 | Wheat | plasma membrane | 59.62 | 57.21 |
| TraesCS3A01G407300.1 | Wheat | plasma membrane | 59.62 | 57.21 |
| TraesCS3B01G440900.1 | Wheat | plasma membrane | 59.15 | 56.76 |
| EES01865 | Sorghum | plasma membrane | 59.15 | 56.76 |
| Os01t0882400-01 | Rice | cytosol, peroxisome | 58.69 | 52.3 |
| Zm00001d012217_P001 | Maize | plasma membrane | 60.09 | 50.0 |
| VIT_05s0020g02280.t01 | Wine grape | plastid | 31.46 | 34.9 |
| VIT_12s0028g03070.t01 | Wine grape | plasma membrane | 34.27 | 34.11 |
| VIT_12s0035g00920.t01 | Wine grape | cytosol, endoplasmic reticulum, peroxisome | 36.62 | 32.64 |
| VIT_13s0106g00720.t01 | Wine grape | plasma membrane | 28.64 | 28.91 |
| VIT_14s0108g00920.t01 | Wine grape | plastid | 28.64 | 28.5 |
| VIT_10s0003g00320.t01 | Wine grape | plasma membrane | 31.92 | 27.76 |
Protein Annotations
| EntrezGene:100247803 | wikigene:100247803 | MapMan:35.1 | ProteinID:CBI38137 | ProteinID:CBI38137.3 | UniProt:D7U5W8 |
| InterPro:DMP | EMBL:FN596511 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005783 | GO:GO:0008150 | GO:GO:0009705 | GO:GO:0009987 | GO:GO:0010256 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016043 | EntrezGene:LOC100247803 | wikigene:LOC100247803 | PFAM:PF05078 |
| PANTHER:PTHR31621 | PANTHER:PTHR31621:SF4 | TMHMM:TMhelix | UniParc:UPI00015CCBBA | ArrayExpress:VIT_18s0086g00700 | EnsemblPlantsGene:VIT_18s0086g00700 |
| EnsemblPlants:VIT_18s0086g00700.t01 | RefSeq:XP_002270278 | RefSeq:XP_002270278.1 | : | : | : |
Description
No Description!
Coordinates
chr18:-:18028062..18028743
Molecular Weight (calculated)
24074.1 Da
IEP (calculated)
8.194
GRAVY (calculated)
0.250
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNSLQQDLI ESYLPDNGSY YCLGDDGTDE SHFIYVLNAI LSGTARLNVL LPTATILAFT IFAPLLTNDG KCYTLNRWLM GFFLAISAAS CIFFLFTDSF
101: RTARGRLYYG VATRNGIWTF NGGRRKPCAP SEYRLRWIDL FHALLSLIAF LTFAGSHNDV LECYHLEMSR KVTNSVPLVV GFVISLLFVV FPSNRRGIGY
201: PFLLQKDALY TRN
101: RTARGRLYYG VATRNGIWTF NGGRRKPCAP SEYRLRWIDL FHALLSLIAF LTFAGSHNDV LECYHLEMSR KVTNSVPLVV GFVISLLFVV FPSNRRGIGY
201: PFLLQKDALY TRN
001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
Arabidopsis Description
DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.