Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_18s0086g00700.t01 | Wine grape | plasma membrane | 62.96 | 63.85 |
| KRH70214 | Soybean | peroxisome | 62.5 | 61.93 |
| KRH08569 | Soybean | peroxisome | 62.04 | 61.19 |
| EES01865 | Sorghum | plasma membrane | 62.5 | 60.81 |
| Solyc10g050200.1.1 | Tomato | plasma membrane | 57.87 | 59.24 |
| PGSC0003DMT400015923 | Potato | plasma membrane | 57.87 | 59.24 |
| TraesCS3D01G402600.1 | Wheat | plasma membrane | 60.65 | 59.01 |
| TraesCS3B01G440900.1 | Wheat | plasma membrane | 60.65 | 59.01 |
| TraesCS3A01G407300.1 | Wheat | plasma membrane | 60.65 | 59.01 |
| Os01t0882400-01 | Rice | cytosol, peroxisome | 62.04 | 56.07 |
| Zm00001d012217_P001 | Maize | plasma membrane | 64.35 | 54.3 |
| GSMUA_AchrUn_... | Banana | plastid | 31.02 | 34.01 |
| GSMUA_Achr8P19660_001 | Banana | cytosol | 31.94 | 33.82 |
| GSMUA_Achr4P10580_001 | Banana | cytosol | 31.94 | 33.17 |
| GSMUA_Achr10P... | Banana | cytosol, plasma membrane, vacuole | 31.94 | 32.7 |
| GSMUA_Achr7P23290_001 | Banana | endoplasmic reticulum | 32.41 | 32.11 |
| GSMUA_Achr4P02720_001 | Banana | plasma membrane | 30.56 | 31.28 |
| GSMUA_Achr6P08370_001 | Banana | cytosol, endoplasmic reticulum, plasma membrane | 27.78 | 30.93 |
| GSMUA_Achr11P... | Banana | plasma membrane | 27.31 | 29.95 |
| GSMUA_Achr10P... | Banana | plastid | 28.7 | 29.67 |
| GSMUA_Achr10P... | Banana | cytosol | 30.09 | 27.9 |
| GSMUA_Achr5P26860_001 | Banana | plasma membrane | 31.94 | 15.61 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P32620_001 | EnsemblPlants:GSMUA_Achr8T32620_001 | EnsemblPlantsGene:GSMUA_Achr8G32620_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF4 | PFAM:PF05078 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000294A30C | UniProt:M0TVL4 | MapMan:35.2 | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G32620_001]
Coordinates
chr8:+:33975185..33975835
Molecular Weight (calculated)
23574.4 Da
IEP (calculated)
8.212
GRAVY (calculated)
0.314
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEHDTCKVL IEGAGARSDP HDDDYDGADE PHLLYILNLI LNGTARLNVL LPTATILAFT IFAPLLTDDG GNCSSLNRWL MAAFVASCAA SCVFFTFTDS
101: FRASFSSGRL YYGVATFRGI WAFNARRKGP QNPAAYRLTW SDLFHASLSL LAFLAFAASH GDVMGCYGVK LPRKVANTVP LVVGFVVSVS FVLFPSKRRG
201: IGYPFLLQRD AVFVKG
101: FRASFSSGRL YYGVATFRGI WAFNARRKGP QNPAAYRLTW SDLFHASLSL LAFLAFAASH GDVMGCYGVK LPRKVANTVP LVVGFVVSVS FVLFPSKRRG
201: IGYPFLLQRD AVFVKG
001: MEKTEESVGI RVYTATPPQK PSPSPPSRSP KPVLISSLPS LPSGAAAGGG RGRKRRMVAQ GVQKTVSKTS MLVNFLPTGT LLMFEMVLPS IYRDGDCNGI
101: NTLMIHLLLL LCAMSCFFFH FTDSFKASDG KIYYGFVTPR GLAVFMKPPP PEFGGGDVIA EAEIPVTDDR YKLTVNDFVH AVMSVLVFMA IAFSDRRVTG
201: CLFPGKEKEM DQVMESFPIM VGIVCSALFL VFPTTRYGVG CMTG
101: NTLMIHLLLL LCAMSCFFFH FTDSFKASDG KIYYGFVTPR GLAVFMKPPP PEFGGGDVIA EAEIPVTDDR YKLTVNDFVH AVMSVLVFMA IAFSDRRVTG
201: CLFPGKEKEM DQVMESFPIM VGIVCSALFL VFPTTRYGVG CMTG
Arabidopsis Description
DMP9Protein DMP9 [Source:UniProtKB/Swiss-Prot;Acc:Q9FK96]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.