Factsheet for GSMUA_Achr10P22370_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
plastid 1
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P19660_001	Banana	cytosol	55.79	63.73
GSMUA_Achr4P10580_001	Banana	cytosol	49.79	55.77
GSMUA_Achr4P02720_001	Banana	plasma membrane	50.21	55.45
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	48.5	53.55
TraesCS1B01G424300.1	Wheat	plasma membrane	48.93	51.82
TraesCS1D01G403800.1	Wheat	plasma membrane	47.64	50.45
TraesCS1A01G395800.1	Wheat	plasma membrane	47.64	50.23
Os05t0562800-02	Rice	plastid	50.64	49.58
EES19945	Sorghum	cytosol	50.64	49.37
Zm00001d009557_P001	Maize	cytosol	48.07	47.46
HORVU1Hr1G087380.1	Barley	mitochondrion	48.93	46.53
TraesCS4A01G176900.1	Wheat	cytosol, peroxisome, plastid, vacuole	40.77	45.89
TraesCS4B01G141000.1	Wheat	plastid	40.34	45.41
TraesCS4D01G135800.1	Wheat	plastid	41.63	44.29
GSMUA_Achr7P23290_001	Banana	endoplasmic reticulum	39.91	42.66
EES05060	Sorghum	cytosol, plasma membrane, vacuole	37.77	42.31
Zm00001d016492_P001	Maize	cytosol, plasma membrane, vacuole	36.91	40.76
Os06t0352200-01	Rice	plasma membrane, plastid	41.2	37.94
Zm00001d046149_P001	Maize	plastid	41.2	37.8
GSMUA_AchrUn_...	Banana	plastid	31.76	37.56
GSMUA_Achr6P08370_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	30.9	37.11
GSMUA_Achr11P...	Banana	plasma membrane	30.47	36.04
EER88463	Sorghum	plastid	42.92	35.97
GSMUA_Achr10P...	Banana	plastid	30.47	33.97
GSMUA_Achr8P32620_001	Banana	plasma membrane	27.9	30.09
GSMUA_Achr5P26860_001	Banana	plasma membrane	33.05	17.42

Protein Annotations

EnsemblPlants:GSMUA_Achr10P22370_001	EnsemblPlants:GSMUA_Achr10T22370_001	EnsemblPlantsGene:GSMUA_Achr10G22370_001	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PFAM:PF05078	SEG:seg	TMHMM:TMhelix	UniParc:UPI00029682BA
UniProt:M0RKG2	MapMan:35.1	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr10G22370_001]

Coordinates

chr10:-:27586522..27587223

Molecular Weight (calculated)

25360.5 Da

IEP (calculated)

6.386

GRAVY (calculated)

0.147

Length

233 amino acids

Sequence
(BLAST)

001: MPYLPSSETG ESSKERSRRT KPATGVQEME NPGREGDPEA QPLLNHEAGD RITAIQQVIS QTYQGTAHLA NHLPTGTVLA FQFLSPAFTT FGRCTESSRF
101: MTACLLALCA LSCFLLSFTD SFYDEATRRV RYGVATFRGL WVIDGLQPVA PELAVSHRLG PLDFLHAFTS LVVFAAVALL DKNVVSCYYP MPTDIELQVL
201: TALPVGIGVL GSALLVTFPT IRHGIGFPVT HTQ

Best Arabidopsis Sequence Match ( AT4G18425.1 )
(BLAST)

001: MEIKVDEGHQ KGTKEDITRP LLEEDKDFPD IERTTWIQKA IGQTFQTTAH LANLLPTGTV LAFQLLSPIF SNGGQCDLVS KIMTSTLVAI CGFSCFILSF
101: TDSYKDKNGT ICYGLATIHG FWIIDGSTTL PQELSKRYKL RFIDFVHAFM SLFVFGAVVL FDRNAVNCFF PSPSAEALEV LTALPVGVGV FSSMLFATFP
201: TTRNGIGFPL SSK

Arabidopsis Description

DMP4Protein DMP4 [Source:UniProtKB/Swiss-Prot;Acc:Q8L928]
SUBAcon: [endoplasmic reticulum,plasma membrane,peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.