Factsheet for GSMUA_Achr11P25590_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_05s0020g02280.t01	Wine grape	plastid	64.47	66.15
GSMUA_Achr6P08370_001	Banana	cytosol, endoplasmic reticulum, plasma membrane	62.44	63.4
PGSC0003DMT400081771	Potato	extracellular	54.82	62.07
Solyc01g080490.2.1	Tomato	extracellular	54.31	61.49
CDY38623	Canola	plasma membrane	57.36	61.08
CDY44328	Canola	plasma membrane	57.36	61.08
Bra031289.1-P	Field mustard	plasma membrane	56.85	60.54
AT3G21550.1	Thale cress	plasma membrane	55.33	59.24
Bra023874.1-P	Field mustard	plasma membrane	55.33	58.92
CDY37280	Canola	plasma membrane	54.82	58.38
CDY19288	Canola	extracellular, plasma membrane, vacuole	54.82	58.38
KRH20960	Soybean	plastid	55.84	53.92
KRH50952	Soybean	plasma membrane, plastid	53.81	47.75
KRH02164	Soybean	endoplasmic reticulum	50.25	47.37
KRH50953	Soybean	plastid	49.24	44.09
GSMUA_AchrUn_...	Banana	plastid	38.07	38.07
GSMUA_Achr8P19660_001	Banana	cytosol	37.06	35.78
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, vacuole	38.07	35.55
GSMUA_Achr7P23290_001	Banana	endoplasmic reticulum	38.58	34.86
GSMUA_Achr4P10580_001	Banana	cytosol	35.03	33.17
GSMUA_Achr4P02720_001	Banana	plasma membrane	34.52	32.23
GSMUA_Achr10P...	Banana	plastid	33.5	31.58
GSMUA_Achr10P...	Banana	cytosol	36.04	30.47
GSMUA_Achr8P32620_001	Banana	plasma membrane	29.95	27.31
GSMUA_Achr5P26860_001	Banana	plasma membrane	38.07	16.97

Protein Annotations

EnsemblPlants:GSMUA_Achr11P25590_001	EnsemblPlants:GSMUA_Achr11T25590_001	EnsemblPlantsGene:GSMUA_Achr11G25590_001	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005773	GO:GO:0005783	GO:GO:0007275	GO:GO:0008150	GO:GO:0009705
GO:GO:0009838	GO:GO:0016020	GO:GO:0016021	InterPro:DMP	PANTHER:PTHR31621	PFAM:PF05078
SEG:seg	TMHMM:TMhelix	UniParc:UPI0002965F34	UniProt:M0RVD9	MapMan:35.1	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G25590_001]

Coordinates

chr11:+:24689037..24689752

Molecular Weight (calculated)

21163.2 Da

IEP (calculated)

7.367

GRAVY (calculated)

0.230

Length

197 amino acids

Sequence
(BLAST)

001: MAGGDQTESL TSSSKATKTV ADKTLKGFGN LIRVLPSGTV FIYQFLNPLL TNKGDCHVVN KYLTGALLCF CGFFCCFSSF TDSYTGSDGK LHYGVATKDG
101: LWPFSDESSG SVDLSKYKLR FGDFVHAFFA LVVFAAISLL DSNSVSCFYP SFGSQQKVVL MVLPPVLGAI ASSVFMVFPN TRHGIGYPPS ETTSDSS

Best Arabidopsis Sequence Match ( AT3G21550.1 )
(BLAST)

001: MSKTFKAIRD RTYSGVGDLI KLLPTGTVFL FQFLNPVLTN NGHCLLINKY LTGVLIVICA FSCCFTCFTD SYRTRDGYVH YGVATVKGLW PDSSSVDLSS
101: KRLRVGDFVH AFFSLIVFSV ISLLDANTVN CFYPGFGSAG KIFLMVLPPV IGVISGAVFT VFPSRRHGIG NPSDHSEDDA SEMK

Arabidopsis Description

DMP2DMP2 [Source:UniProtKB/TrEMBL;Acc:A0A178VDX9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.