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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 2
  • plasma membrane 2
  • golgi 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d007047_P001 Maize golgi, plasma membrane, vacuole 72.4 84.21
Os07t0645300-01 Rice plasma membrane, vacuole 66.52 78.19
HORVU5Hr1G034760.1 Barley plasma membrane 34.84 70.64
TraesCS2D01G145200.1 Wheat cytosol, peroxisome, vacuole 66.06 69.19
TraesCS2A01G141700.1 Wheat cytosol, peroxisome, vacuole 65.61 68.72
HORVU2Hr1G025080.1 Barley cytosol, peroxisome, vacuole 65.16 67.92
TraesCS2B01G166900.1 Wheat cytosol, plasma membrane, vacuole 65.16 67.61
EER94799 Sorghum plasma membrane 44.34 50.78
Bra023875.1-P Field mustard endoplasmic reticulum, plasma membrane, plastid, vacuole 39.37 43.07
CDY19287 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 39.37 43.07
CDY37281 Canola endoplasmic reticulum, plasma membrane, plastid, vacuole 39.37 43.07
CDY38622 Canola endoplasmic reticulum, plasma membrane, vacuole 39.37 42.65
Bra031287.1-P Field mustard plasma membrane 38.91 42.16
AT3G21520.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 38.91 41.55
CDY44329 Canola endoplasmic reticulum, extracellular, vacuole 7.24 35.56
EES05060 Sorghum cytosol, plasma membrane, vacuole 33.03 35.1
KXG32858 Sorghum plastid 23.53 33.55
EER89477 Sorghum plastid 32.13 33.49
KXG33079 Sorghum cytosol, endoplasmic reticulum, plasma membrane 31.22 33.17
EES19945 Sorghum cytosol 34.84 32.22
EES14365 Sorghum cytosol, endoplasmic reticulum, mitochondrion, plastid 33.94 30.0
KXG19859 Sorghum plasma membrane 29.86 29.07
KXG19680 Sorghum plastid 31.22 28.28
OQU76129 Sorghum plastid 28.96 28.19
KXG32269 Sorghum cytosol, peroxisome, plasma membrane 29.41 28.14
EES01865 Sorghum plasma membrane 26.7 26.58
EER88463 Sorghum plastid 31.22 24.82
KXG32859 Sorghum plastid 25.34 24.67
Protein Annotations
MapMan:35.1EntrezGene:8072211UniProt:C5X403InterPro:DMPEnsemblPlants:EER97642ProteinID:EER97642
ProteinID:EER97642.1GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773
GO:GO:0005783GO:GO:0007275GO:GO:0008150GO:GO:0009705GO:GO:0009987GO:GO:0010256
GO:GO:0016020GO:GO:0016021GO:GO:0016043GO:GO:0061025GO:GO:0090148GO:GO:0090158
GO:GO:0090693PFAM:PF05078PANTHER:PTHR31621PANTHER:PTHR31621:SF1EnsemblPlantsGene:SORBI_3002G396600TMHMM:TMhelix
UniParc:UPI0001A8347CRefSeq:XP_002461121.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr2:+:74859899..74861216
Molecular Weight (calculated)
22657.1 Da
IEP (calculated)
7.338
GRAVY (calculated)
0.371
Length
221 amino acids
Sequence
(BLAST)
001: MEEGIKEGAD KAAATTEAGG EANKSTATSA AGSSGMADVT FKSIGDVLKL LPTATVIVYE VLNPIVTNTG NCGAVGYKIA TGILLAVSAF FCAFSTFTDS
101: YVGADDGKVK YGLVTPRGLL PFTDGGAATS GRDFSKYRLR FGDFVHAAFA VAVFAAVSLL ADANTVACFY PSLRDKQKEV VMALPVVVGA VASVVFVVFP
201: STRHGIGYPP SKSGTSALAS Q
Best Arabidopsis Sequence Match ( AT3G21520.1 )
(BLAST)
001: MSETSLLIPK TNSPASSENM ANTNKSLTGL ESLIKLLPTG TLFIYLLLNP VLTNDGECST GNKVMSSILV ALCSFSCVFS CFTDSFKGVD GSRKFGIVTK
101: KGLWTYAEPG SVDLSKYKLR IADFVHAGFV LAVFGTLVLL DANTASCFYP RFRETQKTLV MALPPAVGVA SATIFALFPS KRSGIGYAPI AEEVGAEEET
201: KKASVSA
Arabidopsis Description
DMP1Protein DMP1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LVF4]
SUBAcon: [endoplasmic reticulum,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.