Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra006030.1-P | Field mustard | plasma membrane | 77.27 | 98.94 |
| CDY56548 | Canola | plastid | 98.35 | 98.35 |
| AT5G39650.1 | Thale cress | plastid | 91.32 | 90.57 |
| CDX74441 | Canola | plastid | 90.5 | 89.75 |
| CDY30259 | Canola | plastid | 46.28 | 84.21 |
| VIT_14s0108g00920.t01 | Wine grape | plastid | 60.74 | 68.69 |
| KRG98790 | Soybean | plasma membrane | 57.85 | 65.42 |
| KRG98781 | Soybean | plasma membrane | 57.44 | 64.95 |
| Solyc05g007920.2.1 | Tomato | cytosol | 56.61 | 60.89 |
| GSMUA_Achr10P... | Banana | plastid | 52.07 | 60.29 |
| Zm00001d044822_P001 | Maize | plastid | 50.83 | 60.0 |
| PGSC0003DMT400090619 | Potato | cytosol | 56.2 | 59.65 |
| EER89477 | Sorghum | plastid | 50.41 | 57.55 |
| CDY38387 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 29.34 | 35.5 |
| CDY35189 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 28.93 | 35.0 |
| CDY29909 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 28.1 | 34.0 |
| CDX92877 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 28.1 | 34.0 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 29.75 | 33.64 |
| CDY24837 | Canola | plasma membrane, plastid | 30.17 | 33.33 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 29.34 | 33.18 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 29.34 | 33.18 |
| CDY34728 | Canola | plasma membrane, plastid | 29.75 | 32.58 |
| CDY08933 | Canola | plasma membrane | 29.34 | 32.13 |
| CDY03457 | Canola | plastid | 28.51 | 31.94 |
| CDY34278 | Canola | plasma membrane, plastid | 28.93 | 31.82 |
| CDY60883 | Canola | cytosol | 29.34 | 31.7 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 29.34 | 31.7 |
| CDY37281 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 25.62 | 30.69 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 25.62 | 30.69 |
| CDY44328 | Canola | plasma membrane | 23.14 | 30.27 |
| CDY33452 | Canola | plasma membrane | 26.86 | 29.95 |
| CDY38623 | Canola | plasma membrane | 22.73 | 29.73 |
| CDY19288 | Canola | extracellular, plasma membrane, vacuole | 22.31 | 29.19 |
| CDX77630 | Canola | plasma membrane | 26.03 | 29.03 |
| CDY34571 | Canola | plasma membrane | 26.03 | 29.03 |
| CDY38622 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 24.38 | 28.92 |
| CDY37280 | Canola | plasma membrane | 21.9 | 28.65 |
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 28.1 | 28.22 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 28.1 | 28.22 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 18.18 | 27.5 |
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 4.13 | 22.22 |
| CDY38243 | Canola | cytosol | 12.4 | 22.06 |
Protein Annotations
| EnsemblPlants:CDX81135 | EnsemblPlantsGene:GSBRNA2T00134587001 | GO:A0A078CWA7 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF11 |
| PFAM:PF05078 | ProteinID:CDX81135 | ProteinID:CDX81135.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0004EB0CB5 |
| MapMan:13.7.1.4 | : | : | : | : | : |
Description
BnaC03g03890D
Coordinates
chrLK031823:+:1883345..1885410
Molecular Weight (calculated)
26328.5 Da
IEP (calculated)
9.034
GRAVY (calculated)
0.138
Length
242 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKTEESVGI KVYTPQKPSP SPPSRSPKPL SISSLPSLPP GAAAGGGRGR KRRMVAQGVQ KTVSKTSMIV NFLPTGTLLM FEMVLPSIYR DGDCNGINTL
101: MIHLLLLLCA TSCFFFHFTD SFKAADEKIY YGFVTPRGLA VFMKPPPPEF GGGGDAFAEA EIPVNDERYK LKVNDFVHAV MSVLVFMAIA FSDRRVTGCL
201: VPGKQKEMDQ VMESFPLMVG IVCSALFLVF PTTRRGVGCM SA
101: MIHLLLLLCA TSCFFFHFTD SFKAADEKIY YGFVTPRGLA VFMKPPPPEF GGGGDAFAEA EIPVNDERYK LKVNDFVHAV MSVLVFMAIA FSDRRVTGCL
201: VPGKQKEMDQ VMESFPLMVG IVCSALFLVF PTTRRGVGCM SA
001: MEKTEESVGI RVYTTTTTQN PSPTSSRSPK PVPLSSLPML PAGAAAGGGK GRKRRMVAKG VQKTVSKTSM LVNFLPTGTL LMFEMVLPTI YRDGDCNGIN
101: TLMIHLLLLL CAMSCFFFHF TDSFKASDGK IYYGFVTPRG LAVFMKPPSP GFGGGDVIAE KEIPVTDERY KLRVNDFVHS VMSVLVFMAI AFSDRRVTGC
201: LFPGKEKEMD QVMESFPLMV GIVCSALFLV FPTSRYGVGC MST
101: TLMIHLLLLL CAMSCFFFHF TDSFKASDGK IYYGFVTPRG LAVFMKPPSP GFGGGDVIAE KEIPVTDERY KLRVNDFVHS VMSVLVFMAI AFSDRRVTGC
201: LFPGKEKEMD QVMESFPLMV GIVCSALFLV FPTSRYGVGC MST
Arabidopsis Description
DMP8Protein DMP8 [Source:UniProtKB/Swiss-Prot;Acc:O80493]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.