Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY70034 | Canola | cytosol, peroxisome, plasma membrane | 99.26 | 56.02 |
| CDX77629 | Canola | cytosol, peroxisome, plasma membrane | 97.79 | 55.19 |
| Bra025040.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 97.06 | 54.77 |
| AT5G46090.1 | Thale cress | plasma membrane | 61.76 | 39.25 |
| CDY33452 | Canola | plasma membrane | 56.62 | 35.48 |
| CDY55785 | Canola | cytosol, peroxisome, plasma membrane | 55.15 | 35.05 |
| CDX76523 | Canola | cytosol, peroxisome, plasma membrane | 55.15 | 35.05 |
| CDX76524 | Canola | cytosol, peroxisome, plasma membrane | 55.15 | 35.05 |
| CDY34571 | Canola | plasma membrane | 55.88 | 35.02 |
| CDX77630 | Canola | plasma membrane | 55.88 | 35.02 |
| CDY60883 | Canola | cytosol | 57.35 | 34.82 |
| CDX78854 | Canola | cytosol, peroxisome, plasma membrane | 55.15 | 33.48 |
| VIT_13s0106g00720.t01 | Wine grape | plasma membrane | 47.79 | 30.81 |
| PGSC0003DMT400081227 | Potato | plasma membrane | 44.12 | 28.71 |
| Solyc02g077640.1.1 | Tomato | plasma membrane | 43.38 | 28.23 |
| KRH21356 | Soybean | cytosol, peroxisome, plasma membrane | 41.91 | 27.01 |
| GSMUA_Achr4P10580_001 | Banana | cytosol | 39.71 | 25.96 |
| KRH50120 | Soybean | peroxisome | 38.97 | 25.48 |
| GSMUA_Achr4P02720_001 | Banana | plasma membrane | 38.24 | 24.64 |
| KRH20387 | Soybean | plasma membrane | 38.24 | 23.96 |
| VIT_10s0003g00320.t01 | Wine grape | plasma membrane | 42.65 | 23.67 |
| KXG33079 | Sorghum | cytosol, endoplasmic reticulum, plasma membrane | 32.35 | 21.15 |
| TraesCS3B01G273700.1 | Wheat | cytosol, peroxisome, plasma membrane | 28.68 | 20.86 |
| Zm00001d011558_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 31.62 | 20.67 |
| CDY34726 | Canola | cytosol, extracellular, peroxisome | 24.26 | 20.62 |
| HORVU1Hr1G087380.1 | Barley | mitochondrion | 36.76 | 20.41 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 31.62 | 20.09 |
| CDY38387 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 29.41 | 20.0 |
| CDY35189 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 29.41 | 20.0 |
| Os05t0562800-02 | Rice | plastid | 34.56 | 19.75 |
| CDY29909 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 28.68 | 19.5 |
| CDX92877 | Canola | cytosol, endoplasmic reticulum, plasma membrane, plastid | 28.68 | 19.5 |
| CDY34728 | Canola | plasma membrane, plastid | 31.62 | 19.46 |
| TraesCS3A01G245800.1 | Wheat | cytosol, peroxisome, plasma membrane | 28.68 | 17.89 |
| CDY03457 | Canola | plastid | 27.94 | 17.59 |
| CDY34278 | Canola | plasma membrane, plastid | 27.94 | 17.27 |
| CDY24837 | Canola | plasma membrane, plastid | 27.21 | 16.89 |
| CDY08933 | Canola | plasma membrane | 27.21 | 16.74 |
| Os06t0352200-01 | Rice | plasma membrane, plastid | 30.88 | 16.6 |
| CDY44328 | Canola | plasma membrane | 22.06 | 16.22 |
| CDY37280 | Canola | plasma membrane | 21.32 | 15.68 |
| CDY19288 | Canola | extracellular, plasma membrane, vacuole | 21.32 | 15.68 |
| CDY38623 | Canola | plasma membrane | 21.32 | 15.68 |
| CDY37281 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 19.85 | 13.37 |
| CDY19287 | Canola | endoplasmic reticulum, plasma membrane, plastid, vacuole | 19.12 | 12.87 |
| CDX81135 | Canola | plastid | 22.06 | 12.4 |
| CDX74441 | Canola | plastid | 22.06 | 12.3 |
| CDY38622 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 18.38 | 12.25 |
| CDY56548 | Canola | plastid | 21.32 | 11.98 |
| CDY30259 | Canola | plastid | 5.15 | 5.26 |
| CDY44329 | Canola | endoplasmic reticulum, extracellular, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY38243 | EnsemblPlantsGene:GSBRNA2T00065592001 | GO:A0A078HN49 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF0 | PFAM:PF05078 | ProteinID:CDY38243 | ProteinID:CDY38243.1 |
| TMHMM:TMhelix | UniParc:UPI0004EEB808 | UniProt:A0A078HN49 | MapMan:35.1 | : | : |
Description
BnaC05g17600DBnaC05g17600D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HN49]
Coordinates
chrLK032419:+:289483..289893
Molecular Weight (calculated)
15478.8 Da
IEP (calculated)
6.517
GRAVY (calculated)
-0.068
Length
136 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIKVDEEAG IDDAHRIIEA KKVRRRIEAE KVRRMIQEEK VPLLEDDKIL IQTREFPAIE RNTWIQKAIG QTFQTTSHLA NLLPTGTVLA YQILSPIFTN
101: AGSCSLASRF MTATLVFICG FSCFILSFPD SYKDLN
101: AGSCSLASRF MTATLVFICG FSCFILSFPD SYKDLN
001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
Arabidopsis Description
DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.