CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38243	Canola	cytosol	56.02	99.26
Bra025040.1-P	Field mustard	cytosol, peroxisome, plasma membrane	98.76	98.76
CDX77629	Canola	cytosol, peroxisome, plasma membrane	98.34	98.34
AT5G46090.1	Thale cress	plasma membrane	68.46	77.1
CDX76523	Canola	cytosol, peroxisome, plasma membrane	64.32	72.43
CDY55785	Canola	cytosol, peroxisome, plasma membrane	64.32	72.43
CDX76524	Canola	cytosol, peroxisome, plasma membrane	64.32	72.43
CDY33452	Canola	plasma membrane	64.32	71.43
CDY34571	Canola	plasma membrane	63.07	70.05
CDY60883	Canola	cytosol	64.73	69.64
CDX77630	Canola	plasma membrane	62.66	69.59
CDX78854	Canola	cytosol, peroxisome, plasma membrane	63.49	68.3
PGSC0003DMT400081227	Potato	plasma membrane	56.02	64.59
VIT_13s0106g00720.t01	Wine grape	plasma membrane	56.02	63.98
Solyc02g077640.1.1	Tomato	plasma membrane	55.19	63.64
KRH21356	Soybean	cytosol, peroxisome, plasma membrane	52.28	59.72
GSMUA_Achr4P10580_001	Banana	cytosol	48.96	56.73
KRH20387	Soybean	plasma membrane	51.04	56.68
GSMUA_Achr4P02720_001	Banana	plasma membrane	48.96	55.92
VIT_10s0003g00320.t01	Wine grape	plasma membrane	54.77	53.88
KXG33079	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	43.57	50.48
KRH50120	Soybean	peroxisome	42.32	49.04
CDY29909	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	40.25	48.5
Zm00001d011558_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	41.49	48.08
CDX92877	Canola	cytosol, endoplasmic reticulum, plasma membrane, plastid	39.83	48.0
CDY38387	Canola	cytosol, endoplasmic reticulum, plasma membrane	39.42	47.5
TraesCS3D01G245600.1	Wheat	cytosol, peroxisome, plasma membrane	41.49	46.73
TraesCS3B01G273700.1	Wheat	cytosol, peroxisome, plasma membrane	36.1	46.52
CDY35189	Canola	cytosol, endoplasmic reticulum, plasma membrane	38.59	46.5
HORVU1Hr1G087380.1	Barley	mitochondrion	46.89	46.12
Os05t0562800-02	Rice	plastid	45.23	45.8
TraesCS3A01G245800.1	Wheat	cytosol, peroxisome, plasma membrane	40.25	44.5
CDY34728	Canola	plasma membrane, plastid	38.59	42.08
CDY24837	Canola	plasma membrane, plastid	37.34	41.1
CDY08933	Canola	plasma membrane	36.51	39.82
CDY03457	Canola	plastid	35.27	39.35
CDY34278	Canola	plasma membrane, plastid	35.27	38.64
Os06t0352200-01	Rice	plasma membrane, plastid	39.83	37.94
CDY44328	Canola	plasma membrane	28.63	37.3
CDY38623	Canola	plasma membrane	27.8	36.22
CDY37280	Canola	plasma membrane	27.39	35.68
CDY19288	Canola	extracellular, plasma membrane, vacuole	26.97	35.14
CDY37281	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	27.39	32.67
CDY19287	Canola	endoplasmic reticulum, plasma membrane, plastid, vacuole	26.56	31.68
CDY34726	Canola	cytosol, extracellular, peroxisome	20.75	31.25
CDY38622	Canola	endoplasmic reticulum, plasma membrane, vacuole	26.14	30.88
CDX74441	Canola	plastid	29.46	29.1
CDY30259	Canola	plastid	15.77	28.57
CDX81135	Canola	plastid	28.22	28.1
CDY56548	Canola	plastid	27.8	27.69
CDY44329	Canola	endoplasmic reticulum, extracellular, vacuole	4.98	26.67

Protein Annotations

EnsemblPlants:CDY70034	EnsemblPlantsGene:GSBRNA2T00095985001	GO:A0A078JT71	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:DMP	PANTHER:PTHR31621	PANTHER:PTHR31621:SF0	PFAM:PF05078	ProteinID:CDY70034	ProteinID:CDY70034.1
TMHMM:TMhelix	UniParc:UPI0004EEF034	UniProt:A0A078JT71	MapMan:35.1	:	:

Description

BnaAnng32400DBnaAnng32400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JT71]

Coordinates

chrLK040983:-:633..1358

Molecular Weight (calculated)

26941.8 Da

IEP (calculated)

6.507

GRAVY (calculated)

0.220

Length

241 amino acids

Sequence
(BLAST)

001: MEIKVDEEAG IDDAHRIIEA KKVRRRIEAE KVRRMIQEEK VPLLEDDKIL IQTREFPAIE RNTWIQKAIG QTFQTTSHLA NLLPTGTVLA YQILSPIFTN
101: AGSCSLASRF MTATLVFICG FSCFILSFTD SYKDLNGNSC YGFATFNGFW IIDGSATLPP ERARTYKLRF IDFAHAIMSF LVFGAVVMFD QNAVKCFIPV
201: PSAEEAEILT ALPVGIGVFC SMLFAIFPTT RHGIGFSLSD K

Best Arabidopsis Sequence Match ( AT5G46090.1 )
(BLAST)

001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK

Arabidopsis Description

DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.