Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G407100.1 | Wheat | nucleus, peroxisome, plasma membrane, plastid | 91.27 | 90.2 |
| TraesCS6B01G469800.1 | Wheat | plastid | 86.11 | 87.85 |
| TraesCS4D01G004900.1 | Wheat | plastid | 84.52 | 85.2 |
| TraesCS5D01G483300.1 | Wheat | cytosol, golgi, peroxisome | 80.56 | 79.61 |
| TraesCS7D01G133200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 31.75 | 44.69 |
| TraesCS2D01G159400.1 | Wheat | peroxisome | 35.71 | 42.25 |
| TraesCS6D01G113400.1 | Wheat | plastid | 35.32 | 41.59 |
| TraesCS6D01G113300.1 | Wheat | plastid | 34.92 | 40.93 |
| GSMUA_AchrUn_... | Banana | plastid | 30.56 | 39.09 |
| TraesCS7D01G479400.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.51 | 37.55 |
| AT5G27370.1 | Thale cress | plasma membrane | 27.78 | 36.65 |
| TraesCS7D01G479500.1 | Wheat | plastid | 35.32 | 36.18 |
| TraesCS6D01G372600.1 | Wheat | plastid | 32.54 | 35.5 |
| TraesCS7D01G479700.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 34.52 | 35.22 |
| TraesCS2D01G054400.1 | Wheat | plastid | 31.75 | 34.93 |
| TraesCS6D01G372500.1 | Wheat | plastid | 33.33 | 34.71 |
| TraesCS6D01G372400.1 | Wheat | plastid | 30.95 | 34.21 |
| Os01t0368500-00 | Rice | golgi, nucleus, plasma membrane | 42.86 | 33.96 |
| TraesCS4D01G135800.1 | Wheat | plastid | 29.37 | 33.79 |
| TraesCS6D01G372200.1 | Wheat | plastid | 30.56 | 33.62 |
| TraesCS6D01G372300.1 | Wheat | plastid | 31.35 | 33.62 |
| TraesCS2D01G054300.1 | Wheat | plastid | 32.14 | 33.47 |
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 21.83 | 32.93 |
| TraesCS7D01G320400.1 | Wheat | plastid | 27.78 | 30.57 |
| TraesCS1D01G403800.1 | Wheat | plasma membrane | 26.59 | 30.45 |
| TraesCS7D01G547500.1 | Wheat | peroxisome, plasma membrane, vacuole | 25.0 | 30.43 |
| TraesCS2D01G145200.1 | Wheat | cytosol, peroxisome, vacuole | 25.0 | 29.86 |
| TraesCS7D01G547000.1 | Wheat | plastid | 27.38 | 28.63 |
| TraesCS3D01G402600.1 | Wheat | plasma membrane | 23.81 | 27.03 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 22.62 | 26.64 |
| TraesCS7D01G547800.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 26.19 | 26.19 |
| TraesCS2D01G054200.1 | Wheat | plasma membrane | 26.98 | 17.99 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G407200.1 | EnsemblPlantsGene:TraesCS6D01G407200 | InterPro:DMP | ncoils:Coil | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF27 |
| PFAM:PF05078 | SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr6D:+:473055969..473056727
Molecular Weight (calculated)
27366.4 Da
IEP (calculated)
9.294
GRAVY (calculated)
-0.134
Length
252 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGAPAETDL PVGEGGEPPK PTRRGGSSSL YDKTLSTASN LARLLPTGTT TAFQTLAPSF TNHGECLSVN RYFTWALILF LGVLCALLSF TDSVTDRHGH
101: TRYGFVHPWG FTPFNSDDPD GGGAIPIGES RRRRMRWRDW LHSVFRFIVF ISLAFCDSGV QKCLVPRESR QWREFLVNMP LASGFLASFV FMIFPSTRHG
201: IGAGPAAAAL DNLTDTNANA NDNAAVKKSK SAPAAADTRV APSTSYQLGH VV
101: TRYGFVHPWG FTPFNSDDPD GGGAIPIGES RRRRMRWRDW LHSVFRFIVF ISLAFCDSGV QKCLVPRESR QWREFLVNMP LASGFLASFV FMIFPSTRHG
201: IGAGPAAAAL DNLTDTNANA NDNAAVKKSK SAPAAADTRV APSTSYQLGH VV
001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
Arabidopsis Description
DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.