Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid, nucleus, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G469800.1 | Wheat | plastid | 88.63 | 91.5 |
| TraesCS6D01G407200.1 | Wheat | endoplasmic reticulum, peroxisome, plasma membrane | 90.2 | 91.27 |
| TraesCS4D01G004900.1 | Wheat | plastid | 86.27 | 88.0 |
| TraesCS5D01G483300.1 | Wheat | cytosol, golgi, peroxisome | 78.43 | 78.43 |
| TraesCS7D01G133200.1 | Wheat | endoplasmic reticulum, plasma membrane, plastid | 31.37 | 44.69 |
| TraesCS2D01G159400.1 | Wheat | peroxisome | 35.29 | 42.25 |
| TraesCS6D01G113400.1 | Wheat | plastid | 35.29 | 42.06 |
| TraesCS6D01G113300.1 | Wheat | plastid | 34.9 | 41.4 |
| GSMUA_AchrUn_... | Banana | plastid | 30.2 | 39.09 |
| AT5G27370.1 | Thale cress | plasma membrane | 28.24 | 37.7 |
| TraesCS7D01G479400.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.08 | 37.55 |
| TraesCS7D01G479500.1 | Wheat | plastid | 35.29 | 36.59 |
| TraesCS7D01G479700.1 | Wheat | cytosol, peroxisome, plasma membrane, plastid | 34.9 | 36.03 |
| TraesCS6D01G372600.1 | Wheat | plastid | 32.55 | 35.93 |
| TraesCS2D01G054400.1 | Wheat | plastid | 31.76 | 35.37 |
| TraesCS6D01G372400.1 | Wheat | plastid | 30.98 | 34.65 |
| TraesCS6D01G372500.1 | Wheat | plastid | 32.55 | 34.3 |
| Os01t0368500-00 | Rice | golgi, nucleus, plasma membrane | 42.75 | 34.28 |
| TraesCS2D01G054300.1 | Wheat | plastid | 32.16 | 33.88 |
| TraesCS4D01G135800.1 | Wheat | plastid | 29.02 | 33.79 |
| TraesCS6D01G372200.1 | Wheat | plastid | 30.2 | 33.62 |
| TraesCS6D01G372300.1 | Wheat | plastid | 30.98 | 33.62 |
| TraesCS7D01G428000.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plasma membrane | 21.57 | 32.93 |
| TraesCS7D01G547500.1 | Wheat | peroxisome, plasma membrane, vacuole | 25.1 | 30.92 |
| TraesCS7D01G320400.1 | Wheat | plastid | 27.45 | 30.57 |
| TraesCS1D01G403800.1 | Wheat | plasma membrane | 25.88 | 30.0 |
| TraesCS2D01G145200.1 | Wheat | cytosol, peroxisome, vacuole | 24.71 | 29.86 |
| TraesCS7D01G547000.1 | Wheat | plastid | 26.67 | 28.22 |
| TraesCS3D01G402600.1 | Wheat | plasma membrane | 23.53 | 27.03 |
| TraesCS3D01G245600.1 | Wheat | cytosol, peroxisome, plasma membrane | 22.35 | 26.64 |
| TraesCS7D01G547800.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 26.27 | 26.59 |
| TraesCS2D01G054200.1 | Wheat | plasma membrane | 27.06 | 18.25 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G407100.1 | EnsemblPlantsGene:TraesCS6D01G407100 | InterPro:DMP | PANTHER:PTHR31621 | PANTHER:PTHR31621:SF27 | PFAM:PF05078 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr6D:+:472997622..472998656
Molecular Weight (calculated)
27643.8 Da
IEP (calculated)
8.649
GRAVY (calculated)
-0.079
Length
255 amino acids
Sequence
(BLAST)
(BLAST)
001: MRGAAAEITM TDLPIGEPPK TKDGGNSSSL YDKTLSTASN LARLLPTGTT TAFQTLAPSF TNHGECLSVN RYFTWALILF LGVLCALLSF TDSVTDRHGH
101: TRYGFVHPWG FTPFNSDDPD GGGAIPTGES RRRRMRWRDW LHSVFRFIVF ISLAFCDSGV QKCLVPHESR GWREFLVNMP LASSFLASFV FMIFPSTRHG
201: IGAGPGAPAA AALDNLTDTN SNANAAVKKS KSAPAAADTR VAPSTSYQQL DHLVV
101: TRYGFVHPWG FTPFNSDDPD GGGAIPTGES RRRRMRWRDW LHSVFRFIVF ISLAFCDSGV QKCLVPHESR GWREFLVNMP LASSFLASFV FMIFPSTRHG
201: IGAGPGAPAA AALDNLTDTN SNANAAVKKS KSAPAAADTR VAPSTSYQQL DHLVV
001: MEINVDEEAG IIKEETVPLL DDQNRNRDLP DIERNTMMQK AIGKTFQTTA NLANLLPTGT VLAFQILSPI CTNVGRCDLT SRFMTALLVS ICGFSCFILS
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
101: FTDSYKDLNG SVCYGFATIH GFWIIDGSAT LPQELSKSYK LRFIDFVHAI MSFLVFGAVV LFDQNVVNCF YPEPSAEVVE LLTTLPVAVG VFCSMVFAKF
201: PTTRHGIGFP LSAK
Arabidopsis Description
DMP6Protein DMP6 [Source:UniProtKB/Swiss-Prot;Acc:Q9FNL3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.