Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d018512_P001 | Maize | cytosol | 54.43 | 11.78 |
| Zm00001d049911_P001 | Maize | cytosol | 41.77 | 10.58 |
| Zm00001d031894_P005 | Maize | cytosol | 45.57 | 10.14 |
| CDY54444 | Canola | cytosol, plastid, vacuole | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.20.58.860 | MapMan:35.2 | UniProt:A0A1D6QAM9 | ProteinID:AQK55374.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0004843 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0006511 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | PANTHER:PTHR10589 |
| PANTHER:PTHR10589:SF30 | InterPro:Peptidase_C12_UCH | UniParc:UPI0002212AC4 | EnsemblPlantsGene:Zm00001d051882 | EnsemblPlants:Zm00001d051882_P001 | EnsemblPlants:Zm00001d051882_T001 |
Description
Ubiquitin carboxyl-terminal hydrolase
Coordinates
chr4:-:173380092..173380400
Molecular Weight (calculated)
9017.8 Da
IEP (calculated)
10.345
GRAVY (calculated)
-0.772
Length
79 amino acids
Sequence
(BLAST)
(BLAST)
1: MNKTSATESL SKSLKEVISA VETVTQKIIM KEEKFKNWKA KNIRRKHNYI PFLFNEDACK EATAKTSGRE SQTAEVVKP
001: MSWLPVESDP GIFTEIIQQM QVKGVQVEEL YSLDFNSLDE IRPVYGLILL YKWRPEEKEN RVVITEPNPN FFFASQIINN ACATQAILSV LMNSSSIDIG
101: SELSELKQFA KEFPPELKGL AINNNEAIRA AHNTFARPDP SSIMEDEELA AAKNLDEDDD VYHYISYLPV DGILYELDGL KEGPISLGQC LGEPEGIEWL
201: RMVQPVVQEQ IDRYSQNEIR FSLLAVVKNR KEMYVAELKE YQRKRERVLQ QLGALQADKY AEKSSYEALD RELSEVNIGI ETVSQKIVME EEKSKNWKKE
301: NMRRKHNYVP FLFNFLKILA DKKKLKPLIA KHHP
101: SELSELKQFA KEFPPELKGL AINNNEAIRA AHNTFARPDP SSIMEDEELA AAKNLDEDDD VYHYISYLPV DGILYELDGL KEGPISLGQC LGEPEGIEWL
201: RMVQPVVQEQ IDRYSQNEIR FSLLAVVKNR KEMYVAELKE YQRKRERVLQ QLGALQADKY AEKSSYEALD RELSEVNIGI ETVSQKIVME EEKSKNWKKE
301: NMRRKHNYVP FLFNFLKILA DKKKLKPLIA KHHP
Arabidopsis Description
UCH1Ubiquitin carboxyl-terminal hydrolase [Source:UniProtKB/Swiss-Prot;Acc:Q9FFF2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.