Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026166.1-P | Field mustard | nucleus | 55.68 | 62.8 |
| CDY36527 | Canola | cytosol | 55.68 | 62.8 |
| CDY39608 | Canola | cytosol | 54.59 | 61.59 |
| AT2G01200.2 | Thale cress | cytosol | 54.59 | 52.88 |
| KRG90903 | Soybean | nucleus | 44.32 | 43.16 |
| VIT_01s0011g04070.t01 | Wine grape | nucleus | 47.03 | 43.07 |
| KRH35895 | Soybean | nucleus | 44.32 | 42.93 |
| Solyc05g008850.2.1 | Tomato | nucleus | 41.08 | 40.43 |
Protein Annotations
| Gene3D:3.10.20.90 | MapMan:35.1 | EntrezGene:838070 | ProteinID:AAF31028.1 | EMBL:AB493458 | ProteinID:ADL70847.1 |
| ProteinID:ADL70853.1 | ProteinID:AEE29261.1 | EMBL:AF334713 | EMBL:AJ458327 | ArrayExpress:AT1G15050 | EnsemblPlantsGene:AT1G15050 |
| RefSeq:AT1G15050 | TAIR:AT1G15050 | RefSeq:AT1G15050-TAIR-G | EnsemblPlants:AT1G15050.1 | TAIR:AT1G15050.1 | InterPro:AUX/IAA_dom |
| InterPro:AUX_IAA | UniProt:C0SUV5 | GO:GO:0003674 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009719 | GO:GO:0009733 | GO:GO:0009734 | GO:GO:0009987 | Symbol:IAA34 | InterPro:IPR000270 |
| RefSeq:NP_172959.2 | InterPro:PB1_dom | PFAM:PF02309 | PO:PO:0000293 | PFscan:PS51745 | PANTHER:PTHR31734 |
| PANTHER:PTHR31734:SF29 | UniProt:Q9C5X0 | SUPFAM:SSF54277 | UniParc:UPI000009D5EA | : | : |
Description
IAA34Auxin-responsive protein IAA34 [Source:UniProtKB/Swiss-Prot;Acc:Q9C5X0]
Coordinates
chr1:-:5181991..5183413
Molecular Weight (calculated)
21406.5 Da
IEP (calculated)
6.945
GRAVY (calculated)
-0.509
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MYCSDPPHPL HLVASDKQQK DHKLILSWKK PTMDSDPLGV FPNSPKYHPY YSQTTEFGGV IDLGLSLRTI QHEIYHSSGQ RYCSNEGYRR KWGYVKVTMD
101: GLVVGRKVCV LDHGSYSTLA HQLEDMFGMQ SVSGLRLFQM ESEFCLVYRD EEGLWRNAGD VPWNEFIESV ERLRITRRND AVLPF
101: GLVVGRKVCV LDHGSYSTLA HQLEDMFGMQ SVSGLRLFQM ESEFCLVYRD EEGLWRNAGD VPWNEFIESV ERLRITRRND AVLPF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.