Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 1
- mitochondrion 2
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_16s0098g00560.t01 | Wine grape | plastid | 70.8 | 68.97 |
| AT1G69230.1 | Thale cress | cytosol | 65.49 | 67.27 |
| VIT_01s0011g00370.t01 | Wine grape | plastid | 69.91 | 60.31 |
| AT2G03680.2 | Thale cress | plastid | 61.95 | 58.82 |
| AT4G23496.1 | Thale cress | nucleus | 44.25 | 50.51 |
| AT5G15600.1 | Thale cress | plastid | 51.33 | 45.67 |
| AT3G02180.1 | Thale cress | cytosol | 47.79 | 44.26 |
Protein Annotations
| MapMan:20.1.5.1.3 | EntrezGene:6240366 | UniProt:A0A178WKE9 | ProteinID:AAF98579.1 | ProteinID:AEE30681.1 | ArrayExpress:AT1G26355 |
| EnsemblPlantsGene:AT1G26355 | RefSeq:AT1G26355 | TAIR:AT1G26355 | RefSeq:AT1G26355-TAIR-G | EnsemblPlants:AT1G26355.1 | TAIR:AT1G26355.1 |
| Unigene:At.73864 | UniProt:B3H4F1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 |
| GO:GO:0005874 | RefSeq:NP_001117356.1 | ProteinID:OAP18800.1 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF12 | Symbol:SP1L1 |
| UniParc:UPI0001739007 | SEG:seg | : | : | : | : |
Description
SP1L1Protein SPIRAL1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:B3H4F1]
Coordinates
chr1:-:9117932..9118611
Molecular Weight (calculated)
11269.0 Da
IEP (calculated)
9.633
GRAVY (calculated)
-0.429
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGVSVGGG QSSLGYLFGS GEAPKPAINN APAPSSETLP ISADPSPKHV AAQTVNVTKQ IPAGINKSST NNYIRADGQN TGNFLTDRPS TKVHAAPGGG
101: SSLDYLFGGG GSN
101: SSLDYLFGGG GSN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.