Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 2
- mitochondrion 2
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038321.1-P | Field mustard | plastid | 70.0 | 69.37 |
| CDY54148 | Canola | plastid | 70.0 | 69.37 |
| AT1G26355.1 | Thale cress | plastid | 67.27 | 65.49 |
| CDY50305 | Canola | plastid | 70.0 | 64.17 |
| Solyc01g010270.2.1 | Tomato | nucleus | 58.18 | 61.54 |
| Solyc03g114970.2.1 | Tomato | nucleus | 60.91 | 60.36 |
| PGSC0003DMT400063325 | Potato | cytosol | 60.91 | 60.36 |
| PGSC0003DMT400056345 | Potato | nucleus | 59.09 | 60.19 |
| AT2G03680.2 | Thale cress | plastid | 61.82 | 57.14 |
| Solyc05g012160.2.1 | Tomato | cytosol | 58.18 | 57.14 |
| PGSC0003DMT400072909 | Potato | cytosol | 58.18 | 57.14 |
| KRH70932 | Soybean | cytosol, mitochondrion, nucleus, plastid | 54.55 | 55.56 |
| AT4G23496.1 | Thale cress | nucleus | 45.45 | 50.51 |
| KRH75073 | Soybean | cytosol, mitochondrion, nucleus, plastid | 52.73 | 45.31 |
| AT3G02180.1 | Thale cress | cytosol | 49.09 | 44.26 |
| AT5G15600.1 | Thale cress | plastid | 49.09 | 42.52 |
| VIT_17s0000g05160.t01 | Wine grape | cytosol | 46.36 | 26.42 |
Protein Annotations
| MapMan:20.1.5.1.3 | EntrezGene:843254 | ProteinID:AAF27065.1 | ProteinID:AAG52493.1 | ProteinID:AEE34898.1 | ProteinID:AEE34899.1 |
| ArrayExpress:AT1G69230 | EnsemblPlantsGene:AT1G69230 | RefSeq:AT1G69230 | TAIR:AT1G69230 | RefSeq:AT1G69230-TAIR-G | EnsemblPlants:AT1G69230.1 |
| TAIR:AT1G69230.1 | EMBL:AY087016 | Unigene:At.35439 | EMBL:BT024676 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0008150 | RefSeq:NP_177083.1 | RefSeq:NP_974110.1 |
| PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0020137 | PANTHER:PTHR33403 |
| PANTHER:PTHR33403:SF11 | UniProt:Q9LE54 | Symbol:SP1L2 | UniParc:UPI00000A42BA | SEG:seg | : |
Description
SP1L2Protein SPIRAL1-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE54]
Coordinates
chr1:-:26026253..26027771
Molecular Weight (calculated)
10882.4 Da
IEP (calculated)
7.687
GRAVY (calculated)
-0.445
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGVSAGGG QSSLGYLFGS GEAPKLAAVN KTPAETESSA HAPPTQAAAA NAVDSIKQVP AGLNSNSANN YMRAEGQNTG NFITDRPSTK VHSAPGGGSS
101: LDYLFGGGSN
101: LDYLFGGGSN
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.