Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 2
- cytosol 1
- mitochondrion 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038321.1-P | Field mustard | plastid | 92.79 | 92.79 |
| CDY50305 | Canola | plastid | 99.1 | 91.67 |
| AT1G69230.1 | Thale cress | cytosol | 69.37 | 70.0 |
| Solyc01g010270.2.1 | Tomato | nucleus | 57.66 | 61.54 |
| PGSC0003DMT400056345 | Potato | nucleus | 57.66 | 59.26 |
| Solyc03g114970.2.1 | Tomato | nucleus | 58.56 | 58.56 |
| PGSC0003DMT400063325 | Potato | cytosol | 58.56 | 58.56 |
| Solyc05g012160.2.1 | Tomato | cytosol | 57.66 | 57.14 |
| PGSC0003DMT400072909 | Potato | cytosol | 57.66 | 57.14 |
| CDY69243 | Canola | plastid | 54.05 | 55.05 |
| CDY45707 | Canola | plastid | 54.95 | 54.95 |
| KRH70932 | Soybean | cytosol, mitochondrion, nucleus, plastid | 53.15 | 54.63 |
| CDY68263 | Canola | nucleus | 48.65 | 54.55 |
| CDY33112 | Canola | cytosol, mitochondrion | 55.86 | 54.39 |
| CDY51204 | Canola | plastid | 57.66 | 53.78 |
| CDY65232 | Canola | nucleus | 47.75 | 53.54 |
| CDY02981 | Canola | cytosol, mitochondrion | 52.25 | 51.79 |
| CDY04162 | Canola | cytosol | 55.86 | 51.24 |
| CDX90984 | Canola | cytosol | 49.55 | 50.46 |
| KRH75073 | Soybean | cytosol, mitochondrion, nucleus, plastid | 53.15 | 46.09 |
| CDX69512 | Canola | cytosol, plastid | 53.15 | 45.74 |
| CDY63421 | Canola | nucleus | 40.54 | 45.45 |
| CDY26443 | Canola | cytosol | 46.85 | 44.44 |
| CDY34708 | Canola | cytosol, plastid | 34.23 | 41.76 |
| CDX91981 | Canola | nucleus | 52.25 | 40.0 |
| CDX85544 | Canola | nucleus, plastid | 47.75 | 35.81 |
| CDX74269 | Canola | cytosol | 51.35 | 28.08 |
| VIT_17s0000g05160.t01 | Wine grape | cytosol | 47.75 | 27.46 |
Protein Annotations
| EnsemblPlants:CDY54148 | EnsemblPlantsGene:GSBRNA2T00013439001 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF11 | ProteinID:CDY54148 | ProteinID:CDY54148.1 |
| UniParc:UPI0004EC149B | UniProt:A0A078IYK1 | MapMan:20.1.5.1.3 | : | : | : |
Description
BnaCnng26280DBnaCnng26280D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYK1]
Coordinates
chrLK033283:+:55166..56703
Molecular Weight (calculated)
11049.7 Da
IEP (calculated)
10.288
GRAVY (calculated)
-0.659
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGVSAGGG QSSLGYLFGS GEAPKPAVNS ASAETQPPPP STTRPKTVAP KPVDITKQGP AGLNSNSANN YMRADGQNSG NFLTDRPSTK VHSAPGGGSS
101: LNYLFGGGSS N
101: LNYLFGGGSS N
001: MGRGVSVGGG QSSLGYLFGS GEAPKPAINN APAPSSETLP ISADPSPKHV AAQTVNVTKQ IPAGINKSST NNYIRADGQN TGNFLTDRPS TKVHAAPGGG
101: SSLDYLFGGG GSN
101: SSLDYLFGGG GSN
Arabidopsis Description
SP1L1Protein SPIRAL1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:B3H4F1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.