Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026545.1-P | Field mustard | plastid | 94.59 | 96.33 |
| CDY69243 | Canola | plastid | 93.69 | 95.41 |
| CDY33112 | Canola | cytosol, mitochondrion | 78.38 | 76.32 |
| CDY02981 | Canola | cytosol, mitochondrion | 75.68 | 75.0 |
| CDY51204 | Canola | plastid | 79.28 | 73.95 |
| CDY04162 | Canola | cytosol | 78.38 | 71.9 |
| AT2G03680.2 | Thale cress | plastid | 76.58 | 71.43 |
| KXG23503 | Sorghum | nucleus | 53.15 | 59.0 |
| Os12t0502000-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 53.15 | 58.42 |
| CDY54148 | Canola | plastid | 54.95 | 54.95 |
| Zm00001d048795_P001 | Maize | mitochondrion | 52.25 | 51.33 |
| Os11t0629400-01 | Rice | extracellular | 53.15 | 51.3 |
| CDY50305 | Canola | plastid | 54.95 | 50.83 |
| CDX90984 | Canola | cytosol | 45.05 | 45.87 |
| CDY65232 | Canola | nucleus | 40.54 | 45.45 |
| EES10151 | Sorghum | mitochondrion | 49.55 | 45.45 |
| CDY68263 | Canola | nucleus | 39.64 | 44.44 |
| CDY63421 | Canola | nucleus | 37.84 | 42.42 |
| CDX69512 | Canola | cytosol, plastid | 48.65 | 41.86 |
| CDY26443 | Canola | cytosol | 43.24 | 41.03 |
| CDY34708 | Canola | cytosol, plastid | 31.53 | 38.46 |
| CDX91981 | Canola | nucleus | 47.75 | 36.55 |
| CDX85544 | Canola | nucleus, plastid | 41.44 | 31.08 |
| Zm00001d023735_P001 | Maize | cytosol, plasma membrane, plastid | 39.64 | 27.33 |
| CDX74269 | Canola | cytosol | 47.75 | 26.11 |
Protein Annotations
| EnsemblPlants:CDY45707 | EnsemblPlantsGene:GSBRNA2T00082507001 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF11 | ProteinID:CDY45707 | ProteinID:CDY45707.1 |
| SEG:seg | UniParc:UPI0004EE1235 | UniProt:A0A078I6G8 | MapMan:20.1.5.1.3 | : | : |
Description
BnaC02g35090DBnaC02g35090D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I6G8]
Coordinates
chrLK032634:+:13499..14625
Molecular Weight (calculated)
11063.9 Da
IEP (calculated)
9.145
GRAVY (calculated)
-0.409
Length
111 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGNSCGGG QSSLNYLFGA PPAPKPTAPA PPAETASPAP APAAVTVTAT TTVEPAELNK QIPAGIKTPV NNYARSEGQN TGNFITDRPS TKVHAAPGGG
101: SSLDYLFTGG K
101: SSLDYLFTGG K
001: MGRGNSCGGG QSSLDYLFGG DAPAPKPVPA PRPAPTESNN GPAPPVTAVT ATALTTATTS VEPAELNKQI PAGIKTPVNN YARAEGQNTG NFLTDRPSTK
101: VHAAPGGGSS LDYLFTGGK
101: VHAAPGGGSS LDYLFTGGK
Arabidopsis Description
SPR1Protein SPIRAL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJW3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.