Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- plastid 2
- cytosol 1
- nucleus 1
- mitochondrion 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY69243 | Canola | plastid | 72.27 | 78.9 |
| Bra026545.1-P | Field mustard | plastid | 71.43 | 77.98 |
| CDY45707 | Canola | plastid | 71.43 | 76.58 |
| CDY33112 | Canola | cytosol, mitochondrion | 70.59 | 73.68 |
| CDY02981 | Canola | cytosol, mitochondrion | 67.23 | 71.43 |
| Bra017377.1-P | Field mustard | cytosol | 70.59 | 69.42 |
| CDY04162 | Canola | cytosol | 70.59 | 69.42 |
| Bra025124.1-P | Field mustard | plastid | 68.91 | 68.91 |
| CDY51204 | Canola | plastid | 67.23 | 67.23 |
| KXG23503 | Sorghum | nucleus | 53.78 | 64.0 |
| Os12t0502000-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 52.94 | 62.38 |
| AT1G26355.1 | Thale cress | plastid | 58.82 | 61.95 |
| AT1G69230.1 | Thale cress | cytosol | 57.14 | 61.82 |
| Os11t0629400-01 | Rice | extracellular | 50.42 | 52.17 |
| Zm00001d048795_P001 | Maize | mitochondrion | 47.9 | 50.44 |
| EES10151 | Sorghum | mitochondrion | 49.58 | 48.76 |
| AT4G23496.1 | Thale cress | nucleus | 39.5 | 47.47 |
| AT3G02180.1 | Thale cress | cytosol | 43.7 | 42.62 |
| AT5G15600.1 | Thale cress | plastid | 43.7 | 40.94 |
| Zm00001d023735_P001 | Maize | cytosol, plasma membrane, plastid | 39.5 | 29.19 |
Protein Annotations
| MapMan:20.1.5.1.3 | EntrezGene:814896 | UniProt:A0A178W0C9 | ProteinID:AAD20083.1 | ProteinID:AEC05735.1 | ProteinID:AEC05736.1 |
| EMBL:AF412118 | ProteinID:ANM61758.1 | ArrayExpress:AT2G03680 | EnsemblPlantsGene:AT2G03680 | RefSeq:AT2G03680 | TAIR:AT2G03680 |
| RefSeq:AT2G03680-TAIR-G | EnsemblPlants:AT2G03680.2 | TAIR:AT2G03680.2 | EMBL:AY045933 | EMBL:AY084847 | EMBL:AY113867 |
| EMBL:AY464947 | Unigene:At.24723 | GO:GO:0003674 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005819 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0005876 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0009524 | GO:GO:0009574 | GO:GO:0009628 | GO:GO:0009653 | GO:GO:0009826 |
| GO:GO:0009987 | GO:GO:0010005 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0040007 | GO:GO:0043622 |
| GO:GO:0051211 | GO:GO:0055028 | GO:GO:0071472 | RefSeq:NP_001154491.1 | RefSeq:NP_001323957.1 | RefSeq:NP_178464.1 |
| ProteinID:OAP11556.1 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007131 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0009053 | PO:PO:0009073 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR33403 |
| PANTHER:PTHR33403:SF11 | UniProt:Q9SJW3 | Symbol:SPR1 | UniParc:UPI000005EC76 | EMBL:Z96936 | SEG:seg |
Description
SPR1Protein SPIRAL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJW3]
Coordinates
chr2:+:1120903..1122055
Molecular Weight (calculated)
11920.8 Da
IEP (calculated)
8.477
GRAVY (calculated)
-0.474
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGNSCGGG QSSLDYLFGG DAPAPKPVPA PRPAPTESNN GPAPPVTAVT ATALTTATTS VEPAELNKQI PAGIKTPVNN YARAEGQNTG NFLTDRPSTK
101: VHAAPGGGSS LDYLFTGGK
101: VHAAPGGGSS LDYLFTGGK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.