Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- plastid 2
- nucleus 3
- cytosol 1
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008685.1-P | Field mustard | cytosol, plastid | 77.17 | 75.97 |
| CDX69512 | Canola | cytosol, plastid | 77.17 | 75.97 |
| AT3G02180.1 | Thale cress | cytosol | 63.78 | 66.39 |
| CDX90984 | Canola | cytosol | 56.69 | 66.06 |
| CDY26443 | Canola | cytosol | 56.69 | 61.54 |
| AT1G26355.1 | Thale cress | plastid | 45.67 | 51.33 |
| AT1G69230.1 | Thale cress | cytosol | 42.52 | 49.09 |
| AT4G23496.1 | Thale cress | nucleus | 37.01 | 47.47 |
| Bra023527.1-P | Field mustard | nucleus, plastid | 54.33 | 46.62 |
| CDX85544 | Canola | nucleus, plastid | 54.33 | 46.62 |
| AT2G03680.2 | Thale cress | plastid | 40.94 | 43.7 |
Protein Annotations
| MapMan:20.1.5.1.3 | EntrezGene:831412 | UniProt:A0A178U7W0 | ProteinID:AED92182.1 | ProteinID:ANM68530.1 | ArrayExpress:AT5G15600 |
| EnsemblPlantsGene:AT5G15600 | RefSeq:AT5G15600 | TAIR:AT5G15600 | RefSeq:AT5G15600-TAIR-G | EnsemblPlants:AT5G15600.1 | TAIR:AT5G15600.1 |
| EMBL:AY087175 | EMBL:BT004163 | EMBL:BT005051 | ProteinID:CAC01759.1 | GO:GO:0003674 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005856 | GO:GO:0005874 | GO:GO:0008150 | RefSeq:NP_001330276.1 |
| RefSeq:NP_197064.1 | ProteinID:OAO90028.1 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007131 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF12 |
| UniProt:Q9LF22 | Symbol:SP1L4 | UniParc:UPI000000C2B8 | SEG:seg | : | : |
Description
SP1L4Protein SPIRAL1-like 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LF22]
Coordinates
chr5:+:5078200..5079327
Molecular Weight (calculated)
12821.6 Da
IEP (calculated)
9.798
GRAVY (calculated)
-0.913
Length
127 amino acids
Sequence
(BLAST)
(BLAST)
001: MGKARGVNSG GGESSLGYLF GSGESVPKPN KPNAKTGFTT TTTTTTTTDG AGGRPKTTTT TTTTGDKNKT EENSAGVRGS PNNYYRSDGQ NCGNFLTERP
101: STKVHAAPGG GSSLGYLFGS GPCGSDK
101: STKVHAAPGG GSSLGYLFGS GPCGSDK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.