Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY02981 | Canola | cytosol, mitochondrion | 77.31 | 82.14 |
| CDY45707 | Canola | plastid | 73.95 | 79.28 |
| CDY33112 | Canola | cytosol, mitochondrion | 75.63 | 78.95 |
| CDY69243 | Canola | plastid | 71.43 | 77.98 |
| CDY04162 | Canola | cytosol | 77.31 | 76.03 |
| AT2G03680.2 | Thale cress | plastid | 67.23 | 67.23 |
| Os12t0502000-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 52.94 | 62.38 |
| KXG23503 | Sorghum | nucleus | 50.42 | 60.0 |
| CDY54148 | Canola | plastid | 53.78 | 57.66 |
| Zm00001d048795_P001 | Maize | mitochondrion | 53.78 | 56.64 |
| CDY50305 | Canola | plastid | 53.78 | 53.33 |
| Os11t0629400-01 | Rice | extracellular | 50.42 | 52.17 |
| EES10151 | Sorghum | mitochondrion | 51.26 | 50.41 |
| CDX90984 | Canola | cytosol | 40.34 | 44.04 |
| CDY65232 | Canola | nucleus | 36.13 | 43.43 |
| CDY68263 | Canola | nucleus | 36.13 | 43.43 |
| CDY63421 | Canola | nucleus | 34.45 | 41.41 |
| CDX69512 | Canola | cytosol, plastid | 44.54 | 41.09 |
| CDY26443 | Canola | cytosol | 40.34 | 41.03 |
| CDY34708 | Canola | cytosol, plastid | 28.57 | 37.36 |
| CDX91981 | Canola | nucleus | 43.7 | 35.86 |
| CDX85544 | Canola | nucleus, plastid | 40.34 | 32.43 |
| Zm00001d023735_P001 | Maize | cytosol, plasma membrane, plastid | 36.13 | 26.71 |
| CDX74269 | Canola | cytosol | 43.7 | 25.62 |
Protein Annotations
| EnsemblPlants:CDY51204 | EnsemblPlantsGene:GSBRNA2T00002957001 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF11 | ProteinID:CDY51204 | ProteinID:CDY51204.1 |
| SEG:seg | UniParc:UPI0004EF2122 | UniProt:A0A078IP74 | MapMan:20.1.5.1.3 | : | : |
Description
BnaA06g39830DBnaA06g39830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IP74]
Coordinates
chrLK032975:-:37667..38784
Molecular Weight (calculated)
11712.6 Da
IEP (calculated)
9.634
GRAVY (calculated)
-0.492
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGNSCGGG QSSLNYLFGG GDAPPPPKPA PAPPAEPANR TSAPAPAPAA ASATAAATTT VEPAKINKEI PAGIKTPVNN YARAEGQNTG NFITDRPSTK
101: VHAAPGGGSS LDYLFTGGK
101: VHAAPGGGSS LDYLFTGGK
001: MGRGNSCGGG QSSLDYLFGG DAPAPKPVPA PRPAPTESNN GPAPPVTAVT ATALTTATTS VEPAELNKQI PAGIKTPVNN YARAEGQNTG NFLTDRPSTK
101: VHAAPGGGSS LDYLFTGGK
101: VHAAPGGGSS LDYLFTGGK
Arabidopsis Description
SPR1Protein SPIRAL1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SJW3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.