Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES10151 | Sorghum | mitochondrion | 81.42 | 76.03 |
| Os11t0629400-01 | Rice | extracellular | 66.37 | 65.22 |
| GSMUA_Achr1P13590_001 | Banana | nucleus | 57.52 | 65.0 |
| GSMUA_Achr1P27180_001 | Banana | cytosol, nucleus, plastid | 56.64 | 64.65 |
| GSMUA_Achr9P07060_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 56.64 | 64.0 |
| GSMUA_Achr6P27400_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 54.87 | 62.0 |
| GSMUA_Achr5P08910_001 | Banana | cytosol | 53.1 | 61.22 |
| Solyc01g010270.2.1 | Tomato | nucleus | 55.75 | 60.58 |
| VIT_16s0098g00560.t01 | Wine grape | plastid | 58.41 | 56.9 |
| PGSC0003DMT400003457 | Potato | nucleus | 54.87 | 56.36 |
| PGSC0003DMT400056345 | Potato | nucleus | 53.1 | 55.56 |
| PGSC0003DMT400072909 | Potato | cytosol | 54.87 | 55.36 |
| Solyc05g012160.2.1 | Tomato | cytosol | 54.87 | 55.36 |
| CDY02981 | Canola | cytosol, mitochondrion | 54.87 | 55.36 |
| CDY51204 | Canola | plastid | 56.64 | 53.78 |
| Bra025124.1-P | Field mustard | plastid | 56.64 | 53.78 |
| CDY33112 | Canola | cytosol, mitochondrion | 53.98 | 53.51 |
| VIT_01s0137g00650.t01 | Wine grape | plastid | 53.1 | 53.1 |
| VIT_14s0068g00230.t01 | Wine grape | cytosol | 54.87 | 52.99 |
| CDY45707 | Canola | plastid | 51.33 | 52.25 |
| Solyc03g114970.2.1 | Tomato | nucleus | 51.33 | 52.25 |
| PGSC0003DMT400063325 | Potato | cytosol | 51.33 | 52.25 |
| CDY04162 | Canola | cytosol | 55.75 | 52.07 |
| Bra017377.1-P | Field mustard | cytosol | 55.75 | 52.07 |
| KRH70932 | Soybean | cytosol, mitochondrion, nucleus, plastid | 49.56 | 51.85 |
| CDY69243 | Canola | plastid | 49.56 | 51.38 |
| Bra026545.1-P | Field mustard | plastid | 49.56 | 51.38 |
| KRH18375 | Soybean | endoplasmic reticulum | 60.18 | 50.0 |
| VIT_01s0011g00370.t01 | Wine grape | plastid | 56.64 | 48.85 |
| AT2G03680.2 | Thale cress | plastid | 50.44 | 47.9 |
| KRG93666 | Soybean | extracellular | 61.95 | 44.87 |
| KRH75073 | Soybean | cytosol, mitochondrion, nucleus, plastid | 48.67 | 42.97 |
| Zm00001d047282_P001 | Maize | mitochondrion | 53.98 | 42.66 |
| Zm00001d029527_P003 | Maize | cytosol | 56.64 | 34.97 |
| Zm00001d040773_P001 | Maize | plastid | 40.71 | 30.87 |
| Zm00001d023735_P001 | Maize | cytosol, plasma membrane, plastid | 41.59 | 29.19 |
| VIT_17s0000g05160.t01 | Wine grape | cytosol | 46.9 | 27.46 |
Protein Annotations
| MapMan:20.1.5.1.3 | ProteinID:AQK48921.1 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005856 | GO:GO:0005876 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0009524 | GO:GO:0009574 |
| GO:GO:0009628 | GO:GO:0009653 | GO:GO:0009826 | GO:GO:0009987 | GO:GO:0010005 | GO:GO:0016043 |
| GO:GO:0016049 | GO:GO:0040007 | GO:GO:0043622 | GO:GO:0051211 | GO:GO:0055028 | GO:GO:0071472 |
| UniProt:K7TUM3 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF12 | UniParc:UPI00022218C5 | EnsemblPlantsGene:Zm00001d048795 | EnsemblPlants:Zm00001d048795_P001 |
| EnsemblPlants:Zm00001d048795_T001 | SEG:seg | : | : | : | : |
Description
SPR1
Coordinates
chr4:+:5650242..5651052
Molecular Weight (calculated)
10917.7 Da
IEP (calculated)
10.149
GRAVY (calculated)
-0.422
Length
113 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGRGVSYG GGQSSLSYLF GGGGGDEAAA APAKPAAAAP APAPVPAAAD GEKLKGIPAG VRGNQSQTNN YFRAQGQNCG NFLTDRPSTK VHAAPGGGSS
101: LGYLFGGGPP GSK
101: LGYLFGGGPP GSK
001: MGRGVSVGGG QSSLGYLFGS GEAPKPAINN APAPSSETLP ISADPSPKHV AAQTVNVTKQ IPAGINKSST NNYIRADGQN TGNFLTDRPS TKVHAAPGGG
101: SSLDYLFGGG GSN
101: SSLDYLFGGG GSN
Arabidopsis Description
SP1L1Protein SPIRAL1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:B3H4F1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.