Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- cytosol 2
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr1P27180_001 | Banana | cytosol, nucleus, plastid | 85.71 | 84.85 |
| GSMUA_Achr6P27400_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 73.47 | 72.0 |
| GSMUA_Achr9P07060_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 70.41 | 69.0 |
| GSMUA_Achr1P13590_001 | Banana | nucleus | 69.39 | 68.0 |
| Os12t0502000-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 69.39 | 67.33 |
| KXG23503 | Sorghum | nucleus | 66.33 | 65.0 |
| Os11t0629400-01 | Rice | extracellular | 67.35 | 57.39 |
| VIT_14s0068g00230.t01 | Wine grape | cytosol | 67.35 | 56.41 |
| PGSC0003DMT400003457 | Potato | nucleus | 61.22 | 54.55 |
| Zm00001d048795_P001 | Maize | mitochondrion | 61.22 | 53.1 |
| EES10151 | Sorghum | mitochondrion | 61.22 | 49.59 |
| KRH18375 | Soybean | endoplasmic reticulum | 67.35 | 48.53 |
| GSMUA_Achr11P... | Banana | nucleus | 44.9 | 43.14 |
| KRG93666 | Soybean | extracellular | 64.29 | 40.38 |
| Zm00001d023735_P001 | Maize | cytosol, plasma membrane, plastid | 46.94 | 28.57 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr5P08910_001 | EnsemblPlants:GSMUA_Achr5T08910_001 | EnsemblPlantsGene:GSMUA_Achr5G08910_001 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF12 | SEG:seg |
| UniParc:UPI000295A63B | UniProt:M0SWX0 | MapMan:20.1.5.1.3 | : | : | : |
Description
SP1L, putative [Source:GMGC_GENE;Acc:GSMUA_Achr5G08910_001]
Coordinates
chr5:+:6483776..6488027
Molecular Weight (calculated)
9826.4 Da
IEP (calculated)
9.145
GRAVY (calculated)
-0.521
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MGRGVSSGGG QSSLGYLFGG GEAPKSVSDD AAPVQKQAPP PPINKEIPAG IQSSQAKTFY RADGQNCGNF ITDRPSTKVH AAPGGGSSLG YLFGNGSN
001: MGRGVSAGGG QSSLGYLFGS GEAPKLAAVN KTPAETESSA HAPPTQAAAA NAVDSIKQVP AGLNSNSANN YMRAEGQNTG NFITDRPSTK VHSAPGGGSS
101: LDYLFGGGSN
101: LDYLFGGGSN
Arabidopsis Description
SP1L2Protein SPIRAL1-like 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE54]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.