Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- nucleus 3
- cytosol 1
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P07060_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 61.82 | 68.0 |
| GSMUA_Achr6P27400_001 | Banana | cytosol, mitochondrion, nucleus, plastid | 59.09 | 65.0 |
| VIT_14s0068g00230.t01 | Wine grape | cytosol | 68.18 | 64.1 |
| PGSC0003DMT400056345 | Potato | nucleus | 61.82 | 62.96 |
| GSMUA_Achr1P27180_001 | Banana | cytosol, nucleus, plastid | 56.36 | 62.63 |
| GSMUA_Achr5P08910_001 | Banana | cytosol | 54.55 | 61.22 |
| KXG23503 | Sorghum | nucleus | 55.45 | 61.0 |
| GSMUA_Achr1P13590_001 | Banana | nucleus | 54.55 | 60.0 |
| PGSC0003DMT400072909 | Potato | cytosol | 60.91 | 59.82 |
| Os12t0502000-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 54.55 | 59.41 |
| Os11t0629400-01 | Rice | extracellular | 60.0 | 57.39 |
| Zm00001d048795_P001 | Maize | mitochondrion | 56.36 | 54.87 |
| PGSC0003DMT400063325 | Potato | cytosol | 53.64 | 53.15 |
| EES10151 | Sorghum | mitochondrion | 57.27 | 52.07 |
| KRH18375 | Soybean | endoplasmic reticulum | 60.0 | 48.53 |
| KRG93666 | Soybean | extracellular | 61.82 | 43.59 |
| PGSC0003DMT400032105 | Potato | nucleus | 40.0 | 41.9 |
| Zm00001d023735_P001 | Maize | cytosol, plasma membrane, plastid | 38.18 | 26.09 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400003457 | EnsemblPlantsGene:PGSC0003DMG400001364 | EntrezGene:102579021 | PANTHER:PTHR33403 | PANTHER:PTHR33403:SF12 | PGSC:PGSC0003DMG400001364 |
| RefSeq:XP_006338353.1 | UniParc:UPI0002967FA8 | UniProt:M0ZLP9 | MapMan:20.1.5.1.3 | : | : |
Description
SP1L [Source:PGSC_GENE;Acc:PGSC0003DMG400001364]
Coordinates
chr2:-:45474487..45476529
Molecular Weight (calculated)
11191.7 Da
IEP (calculated)
9.661
GRAVY (calculated)
-0.764
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRGVSAGGG QSSLGYLFGS GEPANNSQTA RNQEKAPTNE PASKPAAVAQ PVDSTKNVPA GIHSNNTNNY FRADGQNCGN FLTERRSTKV QAAPGGGSSL
101: GYLFGDGSSK
101: GYLFGDGSSK
001: MGRGVSVGGG QSSLGYLFGS GEAPKPAINN APAPSSETLP ISADPSPKHV AAQTVNVTKQ IPAGINKSST NNYIRADGQN TGNFLTDRPS TKVHAAPGGG
101: SSLDYLFGGG GSN
101: SSLDYLFGGG GSN
Arabidopsis Description
SP1L1Protein SPIRAL1-like 1 [Source:UniProtKB/Swiss-Prot;Acc:B3H4F1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.